EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0032181 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 108991 bases
Position: chr7:102316202-102425192
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0084528	MMR_HSR1	PF01926.23	2.3e-05	1	1
MGP_CBAJ_P0084529	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0084530	-	1304	-	MGP_CBAJ_P0084530	175 (aa)	-	-
MGP_CBAJ_T0084528	-	2039	XM_006508293	MGP_CBAJ_P0084528	203 (aa)	XP_006508356	Q923S9
MGP_CBAJ_T0084529	-	1406	-	MGP_CBAJ_P0084529	203 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0032181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0032181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0032181	Rab30	83	42.012	MGP_CBAJ_G0018887	Rab5c	78	42.012
MGP_CBAJ_G0032181	Rab30	83	47.929	MGP_CBAJ_G0023833	Rab18	82	47.929
MGP_CBAJ_G0032181	Rab30	90	42.391	MGP_CBAJ_G0027714	Rab2a	87	42.391
MGP_CBAJ_G0032181	Rab30	81	33.735	MGP_CBAJ_G0034821	Mras	79	33.735
MGP_CBAJ_G0032181	Rab30	78	38.272	MGP_CBAJ_G0017083	Rab36	61	38.272
MGP_CBAJ_G0032181	Rab30	86	43.678	MGP_CBAJ_G0023588	Rab5a	81	43.678
MGP_CBAJ_G0032181	Rab30	87	37.500	MGP_CBAJ_G0015645	Rab23	74	37.500
MGP_CBAJ_G0032181	Rab30	77	35.625	MGP_CBAJ_G0018491	Rab34	62	35.625
MGP_CBAJ_G0032181	Rab30	79	39.157	MGP_CBAJ_G0035761	Rab9b	82	39.157
MGP_CBAJ_G0032181	Rab30	82	31.737	MGP_CBAJ_G0029020	Rheb	88	31.737
MGP_CBAJ_G0032181	Rab30	73	33.108	MGP_CBAJ_G0029787	Ran	73	33.108
MGP_CBAJ_G0032181	Rab30	81	32.317	MGP_CBAJ_G0031247	Rasl2-9	75	32.317
MGP_CBAJ_G0032181	Rab30	84	45.614	MGP_CBAJ_G0021002	Rab2b	81	48.718
MGP_CBAJ_G0032181	Rab30	80	43.558	MGP_CBAJ_G0023237	Rab11b	96	43.558
MGP_CBAJ_G0032181	Rab30	80	42.331	MGP_CBAJ_G0026654	Rab22a	84	42.331
MGP_CBAJ_G0032181	Rab30	97	37.981	MGP_CBAJ_G0034597	Rab11a	91	44.604
MGP_CBAJ_G0032181	Rab30	97	41.546	MGP_CBAJ_G0027089	Rab25	96	41.546
MGP_CBAJ_G0032181	Rab30	81	47.059	MGP_CBAJ_G0026890	Rab33b	74	47.059
MGP_CBAJ_G0032181	Rab30	79	42.857	MGP_CBAJ_G0032241	Rab6a	77	42.857
MGP_CBAJ_G0032181	Rab30	86	50.286	MGP_CBAJ_G0029638	Rab35	86	50.286
MGP_CBAJ_G0032181	Rab30	83	42.857	MGP_CBAJ_G0017609	Rab5b	78	42.857
MGP_CBAJ_G0032181	Rab30	86	42.529	MGP_CBAJ_G0019579	Rab15	82	42.529
MGP_CBAJ_G0032181	Rab30	81	51.176	MGP_CBAJ_G0035341	Rab33a	72	51.176
MGP_CBAJ_G0032181	Rab30	80	48.466	MGP_CBAJ_G0019092	Rab37	75	48.466
MGP_CBAJ_G0032181	Rab30	78	40.854	MGP_CBAJ_G0030668	Rab7	92	42.222
MGP_CBAJ_G0032181	Rab30	76	42.857	MGP_CBAJ_G0023678	Rab31	79	42.857
MGP_CBAJ_G0032181	Rab30	95	38.889	MGP_CBAJ_G0035911	Rab9	97	38.889
MGP_CBAJ_G0032181	Rab30	84	34.503	MGP_CBAJ_G0027365	Nras	96	34.932
MGP_CBAJ_G0032181	Rab30	82	50.000	MGP_CBAJ_G0024398	Rab1b	83	50.000
MGP_CBAJ_G0032181	Rab30	82	50.602	MGP_CBAJ_G0017793	Rab1a	81	50.602
MGP_CBAJ_G0032181	Rab30	87	33.146	MGP_CBAJ_G0031143	Kras	93	33.146
MGP_CBAJ_G0032181	Rab30	79	34.756	MGP_CBAJ_G0021943	Rabl2	70	34.756
MGP_CBAJ_G0032181	Rab30	79	41.615	MGP_CBAJ_G0034845	Rab6b	77	41.615
MGP_CBAJ_G0032181	Rab30	89	34.426	MGP_CBAJ_G0032883	Hras	94	34.426
MGP_CBAJ_G0032181	Rab30	89	40.556	MGP_CBAJ_G0025362	Rab14	91	43.478
MGP_CBAJ_G0032181	Rab30	78	48.447	MGP_CBAJ_G0035514	Rab39b	76	48.447
MGP_CBAJ_G0032181	Rab30	88	47.778	MGP_CBAJ_G0023687	Rab12	62	47.778