EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0032241 (Gene tree)
Gene ID: -
Gene Symbol: Rab6a
Alias: 2610028L11Rik|AA419671|Rab6|Rab6 {ECO:0000313|EMBL:EDL16462.1,GN ECO:0000313|MGI:MGI:894313}|Rab6 {ECO:0000313|EMBL:EDL16464.1,GN ECO:0000313|MGI:MGI:894313}|Rab6A
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 35124 bases
Position: chr7:111127232-111162355
Accession: 894313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0084781	MMR_HSR1	PF01926.23	9.1e-05	1	1
MGP_CBAJ_P0084782	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0084782	-	3115	-	MGP_CBAJ_P0084782	208 (aa)	-	-
MGP_CBAJ_T0084783	-	567	-	-	- (aa)	-	-
MGP_CBAJ_T0084780	-	2622	-	MGP_CBAJ_P0084780	175 (aa)	-	P35279
MGP_CBAJ_T0084781	-	3219	-	MGP_CBAJ_P0084781	208 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0032241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0032241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0032241	Rab6a	93	35.000	MGP_CBAJ_G0035911	Rab9	96	35.000
MGP_CBAJ_G0032241	Rab6a	95	37.561	MGP_CBAJ_G0035341	Rab33a	86	37.561
MGP_CBAJ_G0032241	Rab6a	94	36.232	MGP_CBAJ_G0025362	Rab14	95	36.232
MGP_CBAJ_G0032241	Rab6a	80	38.922	MGP_CBAJ_G0023678	Rab31	86	38.922
MGP_CBAJ_G0032241	Rab6a	56	30.000	MGP_CBAJ_G0018930	Arl4d	58	30.000
MGP_CBAJ_G0032241	Rab6a	94	38.384	MGP_CBAJ_G0017793	Rab1a	94	38.384
MGP_CBAJ_G0032241	Rab6a	95	30.151	MGP_CBAJ_G0032883	Hras	98	30.151
MGP_CBAJ_G0032241	Rab6a	75	32.278	MGP_CBAJ_G0031143	Kras	83	32.278
MGP_CBAJ_G0032241	Rab6a	85	37.634	MGP_CBAJ_G0018491	Rab34	72	37.634
MGP_CBAJ_G0032241	Rab6a	77	42.857	MGP_CBAJ_G0032181	Rab30	79	42.857
MGP_CBAJ_G0032241	Rab6a	77	42.857	MGP_CBAJ_G0019092	Rab37	75	42.857
MGP_CBAJ_G0032241	Rab6a	94	35.784	MGP_CBAJ_G0026890	Rab33b	86	35.784
MGP_CBAJ_G0032241	Rab6a	98	41.546	MGP_CBAJ_G0023588	Rab5a	95	41.546
MGP_CBAJ_G0032241	Rab6a	88	31.915	MGP_CBAJ_G0021943	Rabl2	83	31.915
MGP_CBAJ_G0032241	Rab6a	90	36.458	MGP_CBAJ_G0019579	Rab15	91	36.458
MGP_CBAJ_G0032241	Rab6a	75	38.217	MGP_CBAJ_G0023237	Rab11b	92	38.217
MGP_CBAJ_G0032241	Rab6a	79	33.721	MGP_CBAJ_G0035761	Rab9b	84	33.721
MGP_CBAJ_G0032241	Rab6a	75	35.625	MGP_CBAJ_G0029020	Rheb	85	35.625
MGP_CBAJ_G0032241	Rab6a	93	38.384	MGP_CBAJ_G0024398	Rab1b	96	38.384
MGP_CBAJ_G0032241	Rab6a	84	44.000	MGP_CBAJ_G0018887	Rab5c	81	44.000
MGP_CBAJ_G0032241	Rab6a	95	36.634	MGP_CBAJ_G0023833	Rab18	94	36.634
MGP_CBAJ_G0032241	Rab6a	77	40.828	MGP_CBAJ_G0021002	Rab2b	79	43.421
MGP_CBAJ_G0032241	Rab6a	75	32.911	MGP_CBAJ_G0027365	Nras	98	33.557
MGP_CBAJ_G0032241	Rab6a	88	34.239	MGP_CBAJ_G0027089	Rab25	86	34.239
MGP_CBAJ_G0032241	Rab6a	81	39.053	MGP_CBAJ_G0026654	Rab22a	87	39.053
MGP_CBAJ_G0032241	Rab6a	100	90.865	MGP_CBAJ_G0034845	Rab6b	100	90.865
MGP_CBAJ_G0032241	Rab6a	76	39.873	MGP_CBAJ_G0015645	Rab23	66	39.873
MGP_CBAJ_G0032241	Rab6a	94	36.150	MGP_CBAJ_G0017083	Rab36	80	36.150
MGP_CBAJ_G0032241	Rab6a	75	39.623	MGP_CBAJ_G0035514	Rab39b	75	39.623
MGP_CBAJ_G0032241	Rab6a	77	30.769	MGP_CBAJ_G0030054	Rasl11a	69	30.769
MGP_CBAJ_G0032241	Rab6a	76	32.500	MGP_CBAJ_G0034821	Mras	76	32.500
MGP_CBAJ_G0032241	Rab6a	91	38.462	MGP_CBAJ_G0027714	Rab2a	89	38.462
MGP_CBAJ_G0032241	Rab6a	76	38.650	MGP_CBAJ_G0030668	Rab7	91	47.191
MGP_CBAJ_G0032241	Rab6a	84	35.955	MGP_CBAJ_G0034597	Rab11a	84	38.281
MGP_CBAJ_G0032241	Rab6a	80	45.181	MGP_CBAJ_G0017609	Rab5b	77	45.181
MGP_CBAJ_G0032241	Rab6a	74	39.610	MGP_CBAJ_G0029638	Rab35	89	35.789
MGP_CBAJ_G0032241	Rab6a	76	40.252	MGP_CBAJ_G0023687	Rab12	55	40.252