EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0032630 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 75448 bases
Position: chr7:136685751-136761198
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0085877	Ago_hook	PF10427.9	3.4e-19	1	1
MGP_CBAJ_P0085874	Ago_hook	PF10427.9	6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0085879	-	939	-	-	- (aa)	-	-
MGP_CBAJ_T0085878	-	4312	-	-	- (aa)	-	-
MGP_CBAJ_T0085877	-	5222	-	MGP_CBAJ_P0085877	1397 (aa)	-	-
MGP_CBAJ_T0085876	-	1783	-	-	- (aa)	-	-
MGP_CBAJ_T0085875	-	3577	-	MGP_CBAJ_P0085875	35 (aa)	-	-
MGP_CBAJ_T0085874	-	8134	-	MGP_CBAJ_P0085874	1880 (aa)	-	-
MGP_CBAJ_T0085873	-	310	-	MGP_CBAJ_P0085873	53 (aa)	-	-
MGP_CBAJ_T0085872	-	640	-	-	- (aa)	-	-
MGP_CBAJ_T0085882	-	3297	-	-	- (aa)	-	-
MGP_CBAJ_T0085880	-	606	-	-	- (aa)	-	-
MGP_CBAJ_T0085881	-	463	-	MGP_CBAJ_P0085881	154 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0032630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0032630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0032630	Tnrc6a	98	44.685	MGP_CBAJ_G0019168	Tnrc6c	99	40.570
MGP_CBAJ_G0032630	Tnrc6a	99	39.671	MGP_CBAJ_G0021806	Tnrc6b	98	37.120