EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0032697 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 21335 bases
Position: chr7:141258145-141279479
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0086288	MMR_HSR1	PF01926.23	2e-08	1	1
MGP_CBAJ_P0086287	MMR_HSR1	PF01926.23	3.5e-08	1	1
MGP_CBAJ_P0086285	MMR_HSR1	PF01926.23	5.1e-08	1	1
MGP_CBAJ_P0086284	MMR_HSR1	PF01926.23	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0086283	-	552	-	-	- (aa)	-	-
MGP_CBAJ_T0086291	-	713	-	-	- (aa)	-	-
MGP_CBAJ_T0086285	-	1048	-	MGP_CBAJ_P0086285	328 (aa)	-	-
MGP_CBAJ_T0086284	-	1454	-	MGP_CBAJ_P0086284	366 (aa)	-	-
MGP_CBAJ_T0086287	-	706	-	MGP_CBAJ_P0086287	186 (aa)	-	-
MGP_CBAJ_T0086286	-	789	-	-	- (aa)	-	-
MGP_CBAJ_T0086289	-	821	-	-	- (aa)	-	-
MGP_CBAJ_T0086288	-	599	-	MGP_CBAJ_P0086288	145 (aa)	-	-
MGP_CBAJ_T0086290	-	242	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0032697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0032697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0032697	Sept1	100	50.000	MGP_CBAJ_G0019166	Sept9	83	46.000
MGP_CBAJ_G0032697	Sept1	100	64.828	MGP_CBAJ_G0016083	Sept2	100	60.748
MGP_CBAJ_G0032697	Sept1	100	43.537	MGP_CBAJ_G0016986	Sept10	71	40.064
MGP_CBAJ_G0032697	Sept1	100	68.276	MGP_CBAJ_G0022318	Sept5	93	63.068
MGP_CBAJ_G0032697	Sept1	100	50.685	MGP_CBAJ_G0021842	Sept3	86	46.575
MGP_CBAJ_G0032697	Sept1	100	59.310	MGP_CBAJ_G0034151	Sept7	76	49.709
MGP_CBAJ_G0032697	Sept1	100	40.136	MGP_CBAJ_G0035285	Sept6	77	41.349
MGP_CBAJ_G0032697	Sept1	100	40.816	MGP_CBAJ_G0029427	Sept11	76	40.762
MGP_CBAJ_G0032697	Sept1	100	47.260	MGP_CBAJ_G0022182	Sept12	77	43.775
MGP_CBAJ_G0032697	Sept1	100	38.095	MGP_CBAJ_G0018024	Sept8	76	36.765
MGP_CBAJ_G0032697	Sept1	100	66.897	MGP_CBAJ_G0018631	Sept4	99	64.516