EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0032704 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 17536 bases
Position: chr7:141466033-141483568
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0086308	zf-C2H2	PF00096.26	5.1e-50	1	9
MGP_CBAJ_P0086308	zf-C2H2	PF00096.26	5.1e-50	2	9
MGP_CBAJ_P0086308	zf-C2H2	PF00096.26	5.1e-50	3	9
MGP_CBAJ_P0086308	zf-C2H2	PF00096.26	5.1e-50	4	9
MGP_CBAJ_P0086308	zf-C2H2	PF00096.26	5.1e-50	5	9
MGP_CBAJ_P0086308	zf-C2H2	PF00096.26	5.1e-50	6	9
MGP_CBAJ_P0086308	zf-C2H2	PF00096.26	5.1e-50	7	9
MGP_CBAJ_P0086308	zf-C2H2	PF00096.26	5.1e-50	8	9
MGP_CBAJ_P0086308	zf-C2H2	PF00096.26	5.1e-50	9	9
MGP_CBAJ_P0086308	zf-met	PF12874.7	2.9e-09	1	2
MGP_CBAJ_P0086308	zf-met	PF12874.7	2.9e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0086308	-	1848	-	MGP_CBAJ_P0086308	456 (aa)	-	-
MGP_CBAJ_T0086309	-	750	-	-	- (aa)	-	-
MGP_CBAJ_T0086312	-	762	-	MGP_CBAJ_P0086312	89 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0032704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0032704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0032704	-	93	40.909	MGP_CBAJ_G0034135	Zfp872	99	40.959
MGP_CBAJ_G0032704	-	88	45.902	MGP_CBAJ_G0026587	Zfp334	76	45.902
MGP_CBAJ_G0032704	-	65	39.487	MGP_CBAJ_G0028710	Zbtb17	58	38.889
MGP_CBAJ_G0032704	-	93	45.865	MGP_CBAJ_G0031491	Zfp93	94	45.865
MGP_CBAJ_G0032704	-	95	44.444	MGP_CBAJ_G0033432	Zfp882	99	44.444
MGP_CBAJ_G0032704	-	65	47.788	MGP_CBAJ_G0030842	Zfp637	71	45.078
MGP_CBAJ_G0032704	-	94	40.404	MGP_CBAJ_G0018126	Zfp867	96	40.404
MGP_CBAJ_G0032704	-	95	45.048	MGP_CBAJ_G0021719	Zfp251	94	45.048
MGP_CBAJ_G0032704	-	67	36.937	MGP_CBAJ_G0031237	Zfp865	78	36.937
MGP_CBAJ_G0032704	-	93	46.075	MGP_CBAJ_G0017981	Zfp454	98	46.075
MGP_CBAJ_G0032704	-	68	41.017	MGP_CBAJ_G0031596	Zfp780b	81	41.017
MGP_CBAJ_G0032704	-	93	36.181	MGP_CBAJ_G0033801	Zfp1	98	39.196
MGP_CBAJ_G0032704	-	78	41.791	MGP_CBAJ_G0029174	Zbtb49	66	45.455
MGP_CBAJ_G0032704	-	97	41.801	MGP_CBAJ_G0022930	Zfp51	95	42.424
MGP_CBAJ_G0032704	-	70	40.789	MGP_CBAJ_G0016294	Zbtb41	54	32.549
MGP_CBAJ_G0032704	-	86	47.297	MGP_CBAJ_G0024306	Zfp236	70	47.297
MGP_CBAJ_G0032704	-	65	41.368	MGP_CBAJ_G0022959	Zscan10	78	41.368
MGP_CBAJ_G0032704	-	98	42.466	MGP_CBAJ_G0022951	Zfp945	98	42.466
MGP_CBAJ_G0032704	-	65	42.222	MGP_CBAJ_G0026625	Zfp64	69	34.538
MGP_CBAJ_G0032704	-	84	46.179	MGP_CBAJ_G0020428	-	59	46.179
MGP_CBAJ_G0032704	-	93	43.234	MGP_CBAJ_G0022928	Zfp677	98	43.234
MGP_CBAJ_G0032704	-	67	43.750	MGP_CBAJ_G0033431	Zfp709	88	44.595
MGP_CBAJ_G0032704	-	66	39.116	MGP_CBAJ_G0030369	Repin1	92	37.415
MGP_CBAJ_G0032704	-	97	61.864	MGP_CBAJ_G0032707	E430018J23Rik	95	61.538
MGP_CBAJ_G0032704	-	67	45.907	MGP_CBAJ_G0032703	Zfp768	51	44.776
MGP_CBAJ_G0032704	-	66	47.973	MGP_CBAJ_G0031659	Zfp420	98	47.973
MGP_CBAJ_G0032704	-	66	45.783	MGP_CBAJ_G0031523	Zfp574	88	36.857
MGP_CBAJ_G0032704	-	66	44.272	MGP_CBAJ_G0031485	Zfp112	56	44.746
MGP_CBAJ_G0032704	-	65	48.214	MGP_CBAJ_G0031229	Zfp628	58	47.458
MGP_CBAJ_G0032704	-	94	45.455	MGP_CBAJ_G0031490	Zfp108	99	43.813
MGP_CBAJ_G0032704	-	93	43.421	MGP_CBAJ_G0031493	Zfp94	96	43.421
MGP_CBAJ_G0032704	-	68	38.754	MGP_CBAJ_G0030499	Prdm5	77	38.754
MGP_CBAJ_G0032704	-	68	40.511	MGP_CBAJ_G0018076	Zfp672	88	43.750
MGP_CBAJ_G0032704	-	95	42.995	MGP_CBAJ_G0026162	Zfp661	96	37.923
MGP_CBAJ_G0032704	-	67	45.283	MGP_CBAJ_G0031492	Zfp61	51	45.283
MGP_CBAJ_G0032704	-	95	44.108	MGP_CBAJ_G0031792	Zfp715	96	44.898
MGP_CBAJ_G0032704	-	93	44.624	MGP_CBAJ_G0020404	Rslcan18	76	44.624
MGP_CBAJ_G0032704	-	92	41.042	MGP_CBAJ_G0020405	Zfp759	99	41.042
MGP_CBAJ_G0032704	-	67	41.212	MGP_CBAJ_G0029510	Gfi1	99	47.222
MGP_CBAJ_G0032704	-	93	45.791	MGP_CBAJ_G0031486	Zfp235	72	46.128
MGP_CBAJ_G0032704	-	71	41.441	MGP_CBAJ_G0033644	Zfp319	88	41.441