EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0032707 (Gene tree)
Gene ID: -
Gene Symbol: E430018J23Rik
Alias: AI480612
Full Name: RIKEN cDNA E430018J23 gene
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 3779 bases
Position: chr7:141488202-141491980
Accession: 2141981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0086313	zf-C2H2	PF00096.26	1.8e-48	1	9
MGP_CBAJ_P0086313	zf-C2H2	PF00096.26	1.8e-48	2	9
MGP_CBAJ_P0086313	zf-C2H2	PF00096.26	1.8e-48	3	9
MGP_CBAJ_P0086313	zf-C2H2	PF00096.26	1.8e-48	4	9
MGP_CBAJ_P0086313	zf-C2H2	PF00096.26	1.8e-48	5	9
MGP_CBAJ_P0086313	zf-C2H2	PF00096.26	1.8e-48	6	9
MGP_CBAJ_P0086313	zf-C2H2	PF00096.26	1.8e-48	7	9
MGP_CBAJ_P0086313	zf-C2H2	PF00096.26	1.8e-48	8	9
MGP_CBAJ_P0086313	zf-C2H2	PF00096.26	1.8e-48	9	9
MGP_CBAJ_P0086313	zf-met	PF12874.7	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0086313	-	3156	XM_006507163	MGP_CBAJ_P0086313	461 (aa)	XP_006507226	D3Z3V4

Gene Model

Click here to download MGP_CBAJ_G0032707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0032707's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0032707	E430018J23Rik	91	46.364	MGP_CBAJ_G0022930	Zfp51	95	46.409
MGP_CBAJ_G0032707	E430018J23Rik	74	47.809	MGP_CBAJ_G0031485	Zfp112	63	47.809
MGP_CBAJ_G0032707	E430018J23Rik	89	48.879	MGP_CBAJ_G0031486	Zfp235	99	48.879
MGP_CBAJ_G0032707	E430018J23Rik	60	48.421	MGP_CBAJ_G0031229	Zfp628	60	47.264
MGP_CBAJ_G0032707	E430018J23Rik	54	38.421	MGP_CBAJ_G0018713	Zfp652	51	32.808
MGP_CBAJ_G0032707	E430018J23Rik	58	42.177	MGP_CBAJ_G0024306	Zfp236	58	42.177
MGP_CBAJ_G0032707	E430018J23Rik	79	43.254	MGP_CBAJ_G0022959	Zscan10	78	43.254
MGP_CBAJ_G0032707	E430018J23Rik	95	42.073	MGP_CBAJ_G0022951	Zfp945	98	42.073
MGP_CBAJ_G0032707	E430018J23Rik	57	44.086	MGP_CBAJ_G0031523	Zfp574	71	38.961
MGP_CBAJ_G0032707	E430018J23Rik	71	32.389	MGP_CBAJ_G0026625	Zfp64	70	32.389
MGP_CBAJ_G0032707	E430018J23Rik	61	42.798	MGP_CBAJ_G0018076	Zfp672	90	42.105
MGP_CBAJ_G0032707	E430018J23Rik	60	47.511	MGP_CBAJ_G0032703	Zfp768	50	47.321
MGP_CBAJ_G0032707	E430018J23Rik	89	45.385	MGP_CBAJ_G0017981	Zfp454	99	44.019
MGP_CBAJ_G0032707	E430018J23Rik	85	48.404	MGP_CBAJ_G0026162	Zfp661	94	42.857
MGP_CBAJ_G0032707	E430018J23Rik	60	35.593	MGP_CBAJ_G0031237	Zfp865	72	35.593
MGP_CBAJ_G0032707	E430018J23Rik	67	47.967	MGP_CBAJ_G0031659	Zfp420	98	47.967
MGP_CBAJ_G0032707	E430018J23Rik	86	39.167	MGP_CBAJ_G0018126	Zfp867	95	39.167
MGP_CBAJ_G0032707	E430018J23Rik	57	41.525	MGP_CBAJ_G0031596	Zfp780b	78	41.525
MGP_CBAJ_G0032707	E430018J23Rik	86	43.798	MGP_CBAJ_G0033432	Zfp882	99	43.798
MGP_CBAJ_G0032707	E430018J23Rik	89	45.247	MGP_CBAJ_G0031491	Zfp93	94	45.247
MGP_CBAJ_G0032707	E430018J23Rik	86	44.000	MGP_CBAJ_G0026587	Zfp334	99	44.000
MGP_CBAJ_G0032707	E430018J23Rik	69	36.765	MGP_CBAJ_G0033644	Zfp319	93	39.245
MGP_CBAJ_G0032707	E430018J23Rik	71	37.838	MGP_CBAJ_G0030499	Prdm5	74	37.838
MGP_CBAJ_G0032707	E430018J23Rik	62	45.283	MGP_CBAJ_G0033431	Zfp709	94	45.660
MGP_CBAJ_G0032707	E430018J23Rik	60	42.197	MGP_CBAJ_G0029510	Gfi1	99	45.038
MGP_CBAJ_G0032707	E430018J23Rik	86	35.381	MGP_CBAJ_G0033801	Zfp1	98	35.381
MGP_CBAJ_G0032707	E430018J23Rik	62	45.000	MGP_CBAJ_G0029174	Zbtb49	64	47.945
MGP_CBAJ_G0032707	E430018J23Rik	90	50.382	MGP_CBAJ_G0021719	Zfp251	94	50.382
MGP_CBAJ_G0032707	E430018J23Rik	57	44.503	MGP_CBAJ_G0030842	Zfp637	84	44.330
MGP_CBAJ_G0032707	E430018J23Rik	86	41.045	MGP_CBAJ_G0034135	Zfp872	99	40.755
MGP_CBAJ_G0032707	E430018J23Rik	61	44.498	MGP_CBAJ_G0030369	Repin1	92	44.076
MGP_CBAJ_G0032707	E430018J23Rik	79	45.070	MGP_CBAJ_G0031792	Zfp715	74	45.070
MGP_CBAJ_G0032707	E430018J23Rik	88	42.647	MGP_CBAJ_G0020405	Zfp759	99	42.373
MGP_CBAJ_G0032707	E430018J23Rik	90	47.390	MGP_CBAJ_G0020404	Rslcan18	82	47.390
MGP_CBAJ_G0032707	E430018J23Rik	92	41.985	MGP_CBAJ_G0022928	Zfp677	99	41.985
MGP_CBAJ_G0032707	E430018J23Rik	59	48.341	MGP_CBAJ_G0031492	Zfp61	51	48.341
MGP_CBAJ_G0032707	E430018J23Rik	85	46.119	MGP_CBAJ_G0031493	Zfp94	96	46.119
MGP_CBAJ_G0032707	E430018J23Rik	62	45.299	MGP_CBAJ_G0031490	Zfp108	70	45.299
MGP_CBAJ_G0032707	E430018J23Rik	95	61.538	MGP_CBAJ_G0032704	-	97	61.864