EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0086565	RRM_1	PF00076.22	2.2e-63	1	3
MGP_CBAJ_P0086565	RRM_1	PF00076.22	2.2e-63	2	3
MGP_CBAJ_P0086565	RRM_1	PF00076.22	2.2e-63	3	3
MGP_CBAJ_P0086569	RRM_1	PF00076.22	2.2e-63	1	3
MGP_CBAJ_P0086569	RRM_1	PF00076.22	2.2e-63	2	3
MGP_CBAJ_P0086569	RRM_1	PF00076.22	2.2e-63	3	3
MGP_CBAJ_P0086562	RRM_1	PF00076.22	3.1e-60	1	3
MGP_CBAJ_P0086562	RRM_1	PF00076.22	3.1e-60	2	3
MGP_CBAJ_P0086562	RRM_1	PF00076.22	3.1e-60	3	3
MGP_CBAJ_P0086564	RRM_1	PF00076.22	7.6e-51	1	3
MGP_CBAJ_P0086564	RRM_1	PF00076.22	7.6e-51	2	3
MGP_CBAJ_P0086564	RRM_1	PF00076.22	7.6e-51	3	3
MGP_CBAJ_P0086570	RRM_1	PF00076.22	1.8e-26	1	2
MGP_CBAJ_P0086570	RRM_1	PF00076.22	1.8e-26	2	2
MGP_CBAJ_P0086568	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0086575	-	674	-	-	- (aa)	-	-
MGP_CBAJ_T0086574	-	1795	-	-	- (aa)	-	-
MGP_CBAJ_T0086573	-	804	-	MGP_CBAJ_P0086573	140 (aa)	-	-
MGP_CBAJ_T0086572	-	560	-	-	- (aa)	-	-
MGP_CBAJ_T0086571	-	784	-	MGP_CBAJ_P0086571	41 (aa)	-	-
MGP_CBAJ_T0086570	-	1344	-	MGP_CBAJ_P0086570	244 (aa)	-	-
MGP_CBAJ_T0086562	-	4442	XM_006507570	MGP_CBAJ_P0086562	392 (aa)	XP_006507633	P70318
MGP_CBAJ_T0086563	-	4257	-	-	- (aa)	-	-
MGP_CBAJ_T0086564	-	2835	-	MGP_CBAJ_P0086564	336 (aa)	-	-
MGP_CBAJ_T0086565	-	2033	-	MGP_CBAJ_P0086565	375 (aa)	-	-
MGP_CBAJ_T0086566	-	953	-	MGP_CBAJ_P0086566	106 (aa)	-	-
MGP_CBAJ_T0086567	-	2326	-	MGP_CBAJ_P0086567	135 (aa)	-	-
MGP_CBAJ_T0086568	-	562	-	MGP_CBAJ_P0086568	107 (aa)	-	-
MGP_CBAJ_T0086569	-	1580	-	MGP_CBAJ_P0086569	375 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0032753	Tial1	64	31.461	MGP_CBAJ_G0035395	Rbmx	90	32.258
MGP_CBAJ_G0032753	Tial1	65	31.481	MGP_CBAJ_G0025044	Celf2	61	34.177
MGP_CBAJ_G0032753	Tial1	67	40.244	MGP_CBAJ_G0017221	Cirbp	85	40.244
MGP_CBAJ_G0032753	Tial1	64	31.461	MGP_CBAJ_G0033470	-	67	31.915
MGP_CBAJ_G0032753	Tial1	99	31.618	MGP_CBAJ_G0026882	Pabpc4l	94	33.333
MGP_CBAJ_G0032753	Tial1	92	32.500	MGP_CBAJ_G0024072	Pabpc2	50	35.036
MGP_CBAJ_G0032753	Tial1	62	32.184	MGP_CBAJ_G0022427	Ncbp2	71	33.333
MGP_CBAJ_G0032753	Tial1	73	33.019	MGP_CBAJ_G0028530	Trnau1ap	60	32.386
MGP_CBAJ_G0032753	Tial1	73	35.897	MGP_CBAJ_G0028241	Elavl4	88	35.897
MGP_CBAJ_G0032753	Tial1	69	31.469	MGP_CBAJ_G0029632	Msi1	56	41.379
MGP_CBAJ_G0032753	Tial1	94	31.783	MGP_CBAJ_G0022842	Pabpc6	56	34.014
MGP_CBAJ_G0032753	Tial1	81	37.333	MGP_CBAJ_G0027235	Celf3	70	34.091
MGP_CBAJ_G0032753	Tial1	73	37.179	MGP_CBAJ_G0034128	Elavl3	90	37.179
MGP_CBAJ_G0032753	Tial1	94	31.008	MGP_CBAJ_G0021507	-	59	31.250
MGP_CBAJ_G0032753	Tial1	81	31.111	MGP_CBAJ_G0019190	Rbfox3	53	31.868
MGP_CBAJ_G0032753	Tial1	53	32.143	MGP_CBAJ_G0034556	Celf6	54	31.818
MGP_CBAJ_G0032753	Tial1	73	32.000	MGP_CBAJ_G0027021	Rbm46	52	30.000
MGP_CBAJ_G0032753	Tial1	94	30.233	MGP_CBAJ_G0028401	Pabpc4	100	33.333
MGP_CBAJ_G0032753	Tial1	72	34.615	MGP_CBAJ_G0028108	Elavl2	93	34.615
MGP_CBAJ_G0032753	Tial1	100	87.440	MGP_CBAJ_G0030638	Tia1	97	86.992
MGP_CBAJ_G0032753	Tial1	67	30.769	MGP_CBAJ_G0033001	Elavl1	95	30.769