EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0033366 (Gene tree)
Gene ID: -
Gene Symbol: Ddx49
Alias: R27090_2
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 9580 bases
Position: chr8:75848630-75858209
Accession: 2136689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0088713	ResIII	PF04851.15	4.2e-06	1	1
MGP_CBAJ_P0088713	DEAD	PF00270.29	7.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0088718	-	297	-	-	- (aa)	-	-
MGP_CBAJ_T0088715	-	599	-	-	- (aa)	-	-
MGP_CBAJ_T0088714	-	2163	-	-	- (aa)	-	-
MGP_CBAJ_T0088717	-	1447	-	-	- (aa)	-	-
MGP_CBAJ_T0088716	-	1103	-	MGP_CBAJ_P0088716	354 (aa)	-	-
MGP_CBAJ_T0088713	-	2137	-	MGP_CBAJ_P0088713	480 (aa)	-	Q4FZF3

Gene Model

Click here to download MGP_CBAJ_G0033366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0033366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0033366	Ddx49	97	49.271	MGP_CBAJ_G0031075	Ddx47	95	45.824
MGP_CBAJ_G0033366	Ddx49	90	37.500	MGP_CBAJ_G0016656	D1Pas1	55	36.316
MGP_CBAJ_G0033366	Ddx49	91	39.521	MGP_CBAJ_G0021780	Ddx17	56	37.903
MGP_CBAJ_G0033366	Ddx49	92	32.402	MGP_CBAJ_G0033733	Ddx28	68	31.649
MGP_CBAJ_G0033366	Ddx49	93	34.897	MGP_CBAJ_G0034722	Ddx43	60	34.913
MGP_CBAJ_G0033366	Ddx49	90	36.919	MGP_CBAJ_G0035227	Ddx3x	55	35.789
MGP_CBAJ_G0033366	Ddx49	95	33.616	MGP_CBAJ_G0020639	Ddx4	52	33.687
MGP_CBAJ_G0033366	Ddx49	87	37.188	MGP_CBAJ_G0019033	Ddx5	71	35.667
MGP_CBAJ_G0033366	Ddx49	92	38.066	MGP_CBAJ_G0016154	Ddx18	56	36.148
MGP_CBAJ_G0033366	Ddx49	98	32.741	MGP_CBAJ_G0025245	Ddx31	63	31.136
MGP_CBAJ_G0033366	Ddx49	95	33.138	MGP_CBAJ_G0016283	Ddx59	58	32.609
MGP_CBAJ_G0033366	Ddx49	68	30.705	MGP_CBAJ_G0022380	Eif4a2	65	30.705
MGP_CBAJ_G0033366	Ddx49	95	48.333	MGP_CBAJ_G0019198	Eif4a3	83	46.067
MGP_CBAJ_G0033366	Ddx49	59	33.175	MGP_CBAJ_G0017747	Ddx56	94	32.627
MGP_CBAJ_G0033366	Ddx49	93	30.175	MGP_CBAJ_G0029554	Ddx51	71	30.573
MGP_CBAJ_G0033366	Ddx49	92	33.238	MGP_CBAJ_G0029763	Ddx55	58	33.056
MGP_CBAJ_G0033366	Ddx49	96	40.909	MGP_CBAJ_G0019324	Ddx1	63	40.909
MGP_CBAJ_G0033366	Ddx49	97	33.046	MGP_CBAJ_G0023338	Ddx39b	86	32.891
MGP_CBAJ_G0033366	Ddx49	76	30.081	MGP_CBAJ_G0018588	Ddx52	61	30.081
MGP_CBAJ_G0033366	Ddx49	94	37.647	MGP_CBAJ_G0018272	Eif4a1	87	40.952
MGP_CBAJ_G0033366	Ddx49	97	38.177	MGP_CBAJ_G0026601	Ddx27	59	33.696
MGP_CBAJ_G0033366	Ddx49	96	33.333	MGP_CBAJ_G0020311	Ddx41	62	32.921
MGP_CBAJ_G0033366	Ddx49	65	33.333	MGP_CBAJ_G0033791	Ddx19b	69	33.333
MGP_CBAJ_G0033366	Ddx49	97	33.333	MGP_CBAJ_G0033503	Ddx39	87	33.156