EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0033588 (Gene tree)
Gene ID: -
Gene Symbol: Chd9
Alias: 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|Kiaa0308|PRIC320|Pric320|mKIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 246844 bases
Position: chr8:98679697-98926540
Accession: 1924001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0089439	ResIII	PF04851.15	3.6e-06	1	1
MGP_CBAJ_P0089438	ResIII	PF04851.15	3.6e-06	1	1
MGP_CBAJ_P0089438	BRK	PF07533.16	3.2e-30	1	2
MGP_CBAJ_P0089438	BRK	PF07533.16	3.2e-30	2	2
MGP_CBAJ_P0089439	BRK	PF07533.16	3.2e-30	1	2
MGP_CBAJ_P0089439	BRK	PF07533.16	3.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0089439	-	11565	-	MGP_CBAJ_P0089439	2885 (aa)	-	-
MGP_CBAJ_T0089438	-	11517	XM_006530568	MGP_CBAJ_P0089438	2869 (aa)	XP_006530631	Q8BYH8

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0033588	Chd9	72	62.298	MGP_CBAJ_G0026504	Chd6	87	68.979
MGP_CBAJ_G0033588	Chd9	83	69.649	MGP_CBAJ_G0027715	Chd7	94	54.334