EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0033801 (Gene tree)
Gene ID: -
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 30117 bases
Position: chr8:122507908-122538024
Accession: 99154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0090044	zf-C2H2	PF00096.26	2.1e-51	1	8
MGP_CBAJ_P0090044	zf-C2H2	PF00096.26	2.1e-51	2	8
MGP_CBAJ_P0090044	zf-C2H2	PF00096.26	2.1e-51	3	8
MGP_CBAJ_P0090044	zf-C2H2	PF00096.26	2.1e-51	4	8
MGP_CBAJ_P0090044	zf-C2H2	PF00096.26	2.1e-51	5	8
MGP_CBAJ_P0090044	zf-C2H2	PF00096.26	2.1e-51	6	8
MGP_CBAJ_P0090044	zf-C2H2	PF00096.26	2.1e-51	7	8
MGP_CBAJ_P0090044	zf-C2H2	PF00096.26	2.1e-51	8	8
MGP_CBAJ_P0090044	zf-met	PF12874.7	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0090044	-	1871	XM_011248348	MGP_CBAJ_P0090044	403 (aa)	XP_011246650	Q3UI68

Gene Model

Click here to download MGP_CBAJ_G0033801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0033801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0033801	Zfp1	98	41.190	MGP_CBAJ_G0026162	Zfp661	96	41.190
MGP_CBAJ_G0033801	Zfp1	99	48.828	MGP_CBAJ_G0017981	Zfp454	98	48.828
MGP_CBAJ_G0033801	Zfp1	99	45.076	MGP_CBAJ_G0022928	Zfp677	99	52.263
MGP_CBAJ_G0033801	Zfp1	98	39.196	MGP_CBAJ_G0032704	-	93	36.181
MGP_CBAJ_G0033801	Zfp1	98	38.214	MGP_CBAJ_G0020405	Zfp759	99	38.214
MGP_CBAJ_G0033801	Zfp1	99	48.548	MGP_CBAJ_G0020404	Rslcan18	86	48.548
MGP_CBAJ_G0033801	Zfp1	60	46.429	MGP_CBAJ_G0031229	Zfp628	60	46.073
MGP_CBAJ_G0033801	Zfp1	68	46.923	MGP_CBAJ_G0031596	Zfp780b	85	46.923
MGP_CBAJ_G0033801	Zfp1	67	46.559	MGP_CBAJ_G0018076	Zfp672	90	46.559
MGP_CBAJ_G0033801	Zfp1	63	49.485	MGP_CBAJ_G0029174	Zbtb49	76	48.611
MGP_CBAJ_G0033801	Zfp1	64	43.137	MGP_CBAJ_G0026625	Zfp64	70	43.137
MGP_CBAJ_G0033801	Zfp1	63	39.716	MGP_CBAJ_G0030369	Repin1	93	39.716
MGP_CBAJ_G0033801	Zfp1	98	47.059	MGP_CBAJ_G0021719	Zfp251	94	47.059
MGP_CBAJ_G0033801	Zfp1	60	43.478	MGP_CBAJ_G0029510	Gfi1	100	46.457
MGP_CBAJ_G0033801	Zfp1	67	40.167	MGP_CBAJ_G0030499	Prdm5	67	50.847
MGP_CBAJ_G0033801	Zfp1	98	51.440	MGP_CBAJ_G0031792	Zfp715	95	51.440
MGP_CBAJ_G0033801	Zfp1	67	42.083	MGP_CBAJ_G0028710	Zbtb17	54	46.512
MGP_CBAJ_G0033801	Zfp1	75	40.183	MGP_CBAJ_G0033644	Zfp319	90	40.183
MGP_CBAJ_G0033801	Zfp1	80	56.500	MGP_CBAJ_G0020428	-	55	57.071
MGP_CBAJ_G0033801	Zfp1	100	42.617	MGP_CBAJ_G0026587	Zfp334	99	54.028
MGP_CBAJ_G0033801	Zfp1	100	49.035	MGP_CBAJ_G0031490	Zfp108	99	50.862
MGP_CBAJ_G0033801	Zfp1	90	60.000	MGP_CBAJ_G0031491	Zfp93	69	52.586
MGP_CBAJ_G0033801	Zfp1	78	61.905	MGP_CBAJ_G0031492	Zfp61	59	61.905
MGP_CBAJ_G0033801	Zfp1	98	50.185	MGP_CBAJ_G0031493	Zfp94	96	50.185
MGP_CBAJ_G0033801	Zfp1	79	46.460	MGP_CBAJ_G0022959	Zscan10	83	46.053
MGP_CBAJ_G0033801	Zfp1	99	52.489	MGP_CBAJ_G0022951	Zfp945	99	52.489
MGP_CBAJ_G0033801	Zfp1	78	57.692	MGP_CBAJ_G0031659	Zfp420	99	57.692
MGP_CBAJ_G0033801	Zfp1	98	35.381	MGP_CBAJ_G0032707	E430018J23Rik	86	35.381
MGP_CBAJ_G0033801	Zfp1	80	52.252	MGP_CBAJ_G0032703	Zfp768	51	52.018
MGP_CBAJ_G0033801	Zfp1	98	45.113	MGP_CBAJ_G0034135	Zfp872	99	45.113
MGP_CBAJ_G0033801	Zfp1	99	48.560	MGP_CBAJ_G0022930	Zfp51	94	48.560
MGP_CBAJ_G0033801	Zfp1	91	55.319	MGP_CBAJ_G0031486	Zfp235	80	55.319
MGP_CBAJ_G0033801	Zfp1	80	57.078	MGP_CBAJ_G0031485	Zfp112	72	57.078
MGP_CBAJ_G0033801	Zfp1	68	46.071	MGP_CBAJ_G0033431	Zfp709	87	46.914
MGP_CBAJ_G0033801	Zfp1	99	42.769	MGP_CBAJ_G0033432	Zfp882	99	45.349
MGP_CBAJ_G0033801	Zfp1	79	40.594	MGP_CBAJ_G0031523	Zfp574	71	40.594
MGP_CBAJ_G0033801	Zfp1	99	39.175	MGP_CBAJ_G0018126	Zfp867	95	39.600
MGP_CBAJ_G0033801	Zfp1	67	45.652	MGP_CBAJ_G0024306	Zfp236	60	45.652
MGP_CBAJ_G0033801	Zfp1	77	57.042	MGP_CBAJ_G0030842	Zfp637	91	57.042
MGP_CBAJ_G0033801	Zfp1	67	39.791	MGP_CBAJ_G0031237	Zfp865	80	39.286