EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0034135 (Gene tree)
Gene ID: -
Gene Symbol: Zfp872
Alias: 9530015I07Rik
Full Name: zinc finger protein 872
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 15478 bases
Position: chr9:21045917-21061394
Accession: 3588272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0091005	zf-C2H2	PF00096.26	6.1e-50	1	9
MGP_CBAJ_P0091005	zf-C2H2	PF00096.26	6.1e-50	2	9
MGP_CBAJ_P0091005	zf-C2H2	PF00096.26	6.1e-50	3	9
MGP_CBAJ_P0091005	zf-C2H2	PF00096.26	6.1e-50	4	9
MGP_CBAJ_P0091005	zf-C2H2	PF00096.26	6.1e-50	5	9
MGP_CBAJ_P0091005	zf-C2H2	PF00096.26	6.1e-50	6	9
MGP_CBAJ_P0091005	zf-C2H2	PF00096.26	6.1e-50	7	9
MGP_CBAJ_P0091005	zf-C2H2	PF00096.26	6.1e-50	8	9
MGP_CBAJ_P0091005	zf-C2H2	PF00096.26	6.1e-50	9	9
MGP_CBAJ_P0091004	zf-C2H2	PF00096.26	6.4e-50	1	9
MGP_CBAJ_P0091004	zf-C2H2	PF00096.26	6.4e-50	2	9
MGP_CBAJ_P0091004	zf-C2H2	PF00096.26	6.4e-50	3	9
MGP_CBAJ_P0091004	zf-C2H2	PF00096.26	6.4e-50	4	9
MGP_CBAJ_P0091004	zf-C2H2	PF00096.26	6.4e-50	5	9
MGP_CBAJ_P0091004	zf-C2H2	PF00096.26	6.4e-50	6	9
MGP_CBAJ_P0091004	zf-C2H2	PF00096.26	6.4e-50	7	9
MGP_CBAJ_P0091004	zf-C2H2	PF00096.26	6.4e-50	8	9
MGP_CBAJ_P0091004	zf-C2H2	PF00096.26	6.4e-50	9	9
MGP_CBAJ_P0091005	zf-met	PF12874.7	8.9e-05	1	1
MGP_CBAJ_P0091004	zf-met	PF12874.7	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0091005	-	1395	-	MGP_CBAJ_P0091005	464 (aa)	-	-
MGP_CBAJ_T0091004	-	2958	-	MGP_CBAJ_P0091004	465 (aa)	-	F7APL9

Gene Model

Click here to download MGP_CBAJ_G0034135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0034135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0034135	Zfp872	81	47.191	MGP_CBAJ_G0031229	Zfp628	60	46.114
MGP_CBAJ_G0034135	Zfp872	86	49.333	MGP_CBAJ_G0031490	Zfp108	68	49.333
MGP_CBAJ_G0034135	Zfp872	94	58.140	MGP_CBAJ_G0031492	Zfp61	63	58.140
MGP_CBAJ_G0034135	Zfp872	99	45.552	MGP_CBAJ_G0031493	Zfp94	96	45.552
MGP_CBAJ_G0034135	Zfp872	71	47.040	MGP_CBAJ_G0031491	Zfp93	63	47.040
MGP_CBAJ_G0034135	Zfp872	96	53.982	MGP_CBAJ_G0030842	Zfp637	88	53.982
MGP_CBAJ_G0034135	Zfp872	99	53.333	MGP_CBAJ_G0018126	Zfp867	95	53.407
MGP_CBAJ_G0034135	Zfp872	99	53.571	MGP_CBAJ_G0021719	Zfp251	68	54.027
MGP_CBAJ_G0034135	Zfp872	87	56.369	MGP_CBAJ_G0033431	Zfp709	96	58.900
MGP_CBAJ_G0034135	Zfp872	99	45.773	MGP_CBAJ_G0022928	Zfp677	98	45.773
MGP_CBAJ_G0034135	Zfp872	99	46.667	MGP_CBAJ_G0017981	Zfp454	98	46.667
MGP_CBAJ_G0034135	Zfp872	96	33.159	MGP_CBAJ_G0030369	Repin1	98	33.159
MGP_CBAJ_G0034135	Zfp872	80	44.330	MGP_CBAJ_G0029174	Zbtb49	78	44.444
MGP_CBAJ_G0034135	Zfp872	95	41.026	MGP_CBAJ_G0031596	Zfp780b	89	41.048
MGP_CBAJ_G0034135	Zfp872	99	44.588	MGP_CBAJ_G0022930	Zfp51	94	44.709
MGP_CBAJ_G0034135	Zfp872	99	50.284	MGP_CBAJ_G0033432	Zfp882	97	44.991
MGP_CBAJ_G0034135	Zfp872	100	50.368	MGP_CBAJ_G0020404	Rslcan18	80	47.959
MGP_CBAJ_G0034135	Zfp872	94	40.800	MGP_CBAJ_G0024306	Zfp236	62	44.318
MGP_CBAJ_G0034135	Zfp872	97	39.935	MGP_CBAJ_G0022959	Zscan10	80	39.935
MGP_CBAJ_G0034135	Zfp872	99	44.904	MGP_CBAJ_G0022951	Zfp945	95	44.904
MGP_CBAJ_G0034135	Zfp872	99	48.746	MGP_CBAJ_G0026162	Zfp661	94	48.507
MGP_CBAJ_G0034135	Zfp872	84	44.156	MGP_CBAJ_G0031237	Zfp865	78	35.776
MGP_CBAJ_G0034135	Zfp872	80	34.050	MGP_CBAJ_G0026625	Zfp64	71	34.082
MGP_CBAJ_G0034135	Zfp872	86	55.623	MGP_CBAJ_G0020428	-	55	52.308
MGP_CBAJ_G0034135	Zfp872	99	45.113	MGP_CBAJ_G0033801	Zfp1	98	45.113
MGP_CBAJ_G0034135	Zfp872	99	40.959	MGP_CBAJ_G0032704	-	93	40.909
MGP_CBAJ_G0034135	Zfp872	84	48.162	MGP_CBAJ_G0032703	Zfp768	51	47.426
MGP_CBAJ_G0034135	Zfp872	86	53.608	MGP_CBAJ_G0031659	Zfp420	99	54.233
MGP_CBAJ_G0034135	Zfp872	87	38.342	MGP_CBAJ_G0018713	Zfp652	69	36.054
MGP_CBAJ_G0034135	Zfp872	84	46.226	MGP_CBAJ_G0031523	Zfp574	93	46.226
MGP_CBAJ_G0034135	Zfp872	80	41.477	MGP_CBAJ_G0029510	Gfi1	100	44.030
MGP_CBAJ_G0034135	Zfp872	94	48.159	MGP_CBAJ_G0031486	Zfp235	75	48.159
MGP_CBAJ_G0034135	Zfp872	88	52.280	MGP_CBAJ_G0031485	Zfp112	60	52.665
MGP_CBAJ_G0034135	Zfp872	99	42.211	MGP_CBAJ_G0026587	Zfp334	99	41.928
MGP_CBAJ_G0034135	Zfp872	93	34.726	MGP_CBAJ_G0018076	Zfp672	100	40.000
MGP_CBAJ_G0034135	Zfp872	95	51.220	MGP_CBAJ_G0031792	Zfp715	75	51.220
MGP_CBAJ_G0034135	Zfp872	99	40.530	MGP_CBAJ_G0030499	Prdm5	82	40.076
MGP_CBAJ_G0034135	Zfp872	99	48.447	MGP_CBAJ_G0020405	Zfp759	99	46.000
MGP_CBAJ_G0034135	Zfp872	83	41.964	MGP_CBAJ_G0028710	Zbtb17	56	42.638
MGP_CBAJ_G0034135	Zfp872	82	34.140	MGP_CBAJ_G0033644	Zfp319	90	34.722
MGP_CBAJ_G0034135	Zfp872	99	40.755	MGP_CBAJ_G0032707	E430018J23Rik	86	41.045