EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0034597 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 24120 bases
Position: chr9:68440699-68464818
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0092340	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_CBAJ_P0092341	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_CBAJ_P0092339	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0092342	-	695	-	-	- (aa)	-	-
MGP_CBAJ_T0092341	-	595	-	MGP_CBAJ_P0092341	155 (aa)	-	-
MGP_CBAJ_T0092340	-	462	-	MGP_CBAJ_P0092340	153 (aa)	-	-
MGP_CBAJ_T0092336	-	603	-	-	- (aa)	-	-
MGP_CBAJ_T0092337	-	500	-	MGP_CBAJ_P0092337	86 (aa)	-	-
MGP_CBAJ_T0092338	-	397	-	-	- (aa)	-	-
MGP_CBAJ_T0092339	-	651	-	MGP_CBAJ_P0092339	216 (aa)	-	-
MGP_CBAJ_T0092335	-	726	-	MGP_CBAJ_P0092335	86 (aa)	-	P62492

Gene Model

Click here to download MGP_CBAJ_G0034597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0034597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0034597	Rab11a	88	31.293	MGP_CBAJ_G0030054	Rasl11a	60	31.293
MGP_CBAJ_G0034597	Rab11a	92	34.752	MGP_CBAJ_G0015645	Rab23	80	32.984
MGP_CBAJ_G0034597	Rab11a	76	31.667	MGP_CBAJ_G0018930	Arl4d	58	31.667
MGP_CBAJ_G0034597	Rab11a	81	34.921	MGP_CBAJ_G0027365	Nras	95	37.931
MGP_CBAJ_G0034597	Rab11a	90	43.066	MGP_CBAJ_G0026654	Rab22a	81	42.038
MGP_CBAJ_G0034597	Rab11a	90	43.796	MGP_CBAJ_G0023687	Rab12	70	37.799
MGP_CBAJ_G0034597	Rab11a	77	37.288	MGP_CBAJ_G0029787	Ran	87	30.899
MGP_CBAJ_G0034597	Rab11a	94	39.423	MGP_CBAJ_G0035911	Rab9	97	39.423
MGP_CBAJ_G0034597	Rab11a	93	41.379	MGP_CBAJ_G0026890	Rab33b	85	37.799
MGP_CBAJ_G0034597	Rab11a	78	31.746	MGP_CBAJ_G0019419	Arl4a	60	31.746
MGP_CBAJ_G0034597	Rab11a	89	43.885	MGP_CBAJ_G0019092	Rab37	77	45.181
MGP_CBAJ_G0034597	Rab11a	91	44.604	MGP_CBAJ_G0032181	Rab30	97	37.981
MGP_CBAJ_G0034597	Rab11a	84	38.281	MGP_CBAJ_G0032241	Rab6a	84	35.955
MGP_CBAJ_G0034597	Rab11a	89	42.143	MGP_CBAJ_G0035761	Rab9b	86	41.040
MGP_CBAJ_G0034597	Rab11a	91	56.115	MGP_CBAJ_G0021002	Rab2b	95	51.366
MGP_CBAJ_G0034597	Rab11a	86	34.586	MGP_CBAJ_G0029020	Rheb	89	32.927
MGP_CBAJ_G0034597	Rab11a	94	35.780	MGP_CBAJ_G0017083	Rab36	79	35.780
MGP_CBAJ_G0034597	Rab11a	93	48.252	MGP_CBAJ_G0023833	Rab18	78	47.531
MGP_CBAJ_G0034597	Rab11a	100	96.078	MGP_CBAJ_G0023237	Rab11b	100	97.647
MGP_CBAJ_G0034597	Rab11a	95	70.748	MGP_CBAJ_G0027089	Rab25	99	62.150
MGP_CBAJ_G0034597	Rab11a	81	34.921	MGP_CBAJ_G0032883	Hras	85	37.654
MGP_CBAJ_G0034597	Rab11a	91	56.835	MGP_CBAJ_G0027714	Rab2a	81	54.971
MGP_CBAJ_G0034597	Rab11a	91	46.763	MGP_CBAJ_G0019579	Rab15	93	40.887
MGP_CBAJ_G0034597	Rab11a	68	30.065	MGP_CBAJ_G0016259	Arl8a	77	30.065
MGP_CBAJ_G0034597	Rab11a	97	52.201	MGP_CBAJ_G0024398	Rab1b	84	55.357
MGP_CBAJ_G0034597	Rab11a	81	34.127	MGP_CBAJ_G0031143	Kras	87	37.725
MGP_CBAJ_G0034597	Rab11a	88	48.148	MGP_CBAJ_G0023588	Rab5a	91	41.951
MGP_CBAJ_G0034597	Rab11a	95	54.110	MGP_CBAJ_G0025362	Rab14	97	54.422
MGP_CBAJ_G0034597	Rab11a	88	49.265	MGP_CBAJ_G0035514	Rab39b	82	46.857
MGP_CBAJ_G0034597	Rab11a	75	40.000	MGP_CBAJ_G0021943	Rabl2	67	37.908
MGP_CBAJ_G0034597	Rab11a	90	49.635	MGP_CBAJ_G0029638	Rab35	99	42.512
MGP_CBAJ_G0034597	Rab11a	79	39.669	MGP_CBAJ_G0031247	Rasl2-9	70	36.364
MGP_CBAJ_G0034597	Rab11a	74	30.303	MGP_CBAJ_G0019282	Dnajc27	60	30.303
MGP_CBAJ_G0034597	Rab11a	88	48.889	MGP_CBAJ_G0017609	Rab5b	75	47.205
MGP_CBAJ_G0034597	Rab11a	88	49.630	MGP_CBAJ_G0018887	Rab5c	90	41.262
MGP_CBAJ_G0034597	Rab11a	88	35.821	MGP_CBAJ_G0034845	Rab6b	77	35.404
MGP_CBAJ_G0034597	Rab11a	81	31.746	MGP_CBAJ_G0034821	Mras	85	32.768
MGP_CBAJ_G0034597	Rab11a	93	42.254	MGP_CBAJ_G0023678	Rab31	86	41.071
MGP_CBAJ_G0034597	Rab11a	100	50.000	MGP_CBAJ_G0017793	Rab1a	85	52.299
MGP_CBAJ_G0034597	Rab11a	87	38.686	MGP_CBAJ_G0030668	Rab7	93	42.857
MGP_CBAJ_G0034597	Rab11a	90	40.426	MGP_CBAJ_G0035341	Rab33a	74	39.665