EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0034722 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 27675 bases
Position: chr9:83884883-83912557
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0092844	KH_1	PF00013.29	4.5e-12	1	1
MGP_CBAJ_P0092844	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0092844	-	2207	-	MGP_CBAJ_P0092844	646 (aa)	-	D3Z6P9

Gene Model

Click here to download MGP_CBAJ_G0034722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0034722's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0034722	Ddx43	55	37.594	MGP_CBAJ_G0018272	Eif4a1	92	37.594
MGP_CBAJ_G0034722	Ddx43	60	40.000	MGP_CBAJ_G0020639	Ddx4	56	40.000
MGP_CBAJ_G0034722	Ddx43	63	34.135	MGP_CBAJ_G0018588	Ddx52	69	34.135
MGP_CBAJ_G0034722	Ddx43	74	36.270	MGP_CBAJ_G0019018	Ddx42	50	36.270
MGP_CBAJ_G0034722	Ddx43	54	42.500	MGP_CBAJ_G0019198	Eif4a3	78	42.500
MGP_CBAJ_G0034722	Ddx43	60	39.012	MGP_CBAJ_G0016656	D1Pas1	61	39.012
MGP_CBAJ_G0034722	Ddx43	55	34.974	MGP_CBAJ_G0016154	Ddx18	56	34.974
MGP_CBAJ_G0034722	Ddx43	57	40.310	MGP_CBAJ_G0035227	Ddx3x	61	39.259
MGP_CBAJ_G0034722	Ddx43	68	41.480	MGP_CBAJ_G0019033	Ddx5	89	44.504
MGP_CBAJ_G0034722	Ddx43	54	30.159	MGP_CBAJ_G0033733	Ddx28	70	30.423
MGP_CBAJ_G0034722	Ddx43	62	33.580	MGP_CBAJ_G0016283	Ddx59	64	33.333
MGP_CBAJ_G0034722	Ddx43	53	31.768	MGP_CBAJ_G0029763	Ddx55	60	32.044
MGP_CBAJ_G0034722	Ddx43	64	36.941	MGP_CBAJ_G0020311	Ddx41	65	37.232
MGP_CBAJ_G0034722	Ddx43	59	35.678	MGP_CBAJ_G0031075	Ddx47	91	34.218
MGP_CBAJ_G0034722	Ddx43	63	40.757	MGP_CBAJ_G0022007	Ddx23	54	40.757
MGP_CBAJ_G0034722	Ddx43	60	34.913	MGP_CBAJ_G0033366	Ddx49	93	34.897
MGP_CBAJ_G0034722	Ddx43	68	43.527	MGP_CBAJ_G0021780	Ddx17	67	43.527