EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0035052 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 1184792 bases
Position: chr9:126976339-128161130
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0094619	RRM_1	PF00076.22	1.5e-32	1	2
MGP_CBAJ_P0094619	RRM_1	PF00076.22	1.5e-32	2	2
MGP_CBAJ_P0094616	RRM_1	PF00076.22	1.2e-31	1	2
MGP_CBAJ_P0094616	RRM_1	PF00076.22	1.2e-31	2	2
MGP_CBAJ_P0094613	RRM_1	PF00076.22	1.4e-31	1	2
MGP_CBAJ_P0094613	RRM_1	PF00076.22	1.4e-31	2	2
MGP_CBAJ_P0094611	RRM_1	PF00076.22	1.5e-31	1	2
MGP_CBAJ_P0094611	RRM_1	PF00076.22	1.5e-31	2	2
MGP_CBAJ_P0094615	RRM_1	PF00076.22	1.5e-31	1	2
MGP_CBAJ_P0094615	RRM_1	PF00076.22	1.5e-31	2	2
MGP_CBAJ_P0094610	RRM_1	PF00076.22	1.7e-31	1	2
MGP_CBAJ_P0094610	RRM_1	PF00076.22	1.7e-31	2	2
MGP_CBAJ_P0094614	RRM_1	PF00076.22	2e-31	1	2
MGP_CBAJ_P0094614	RRM_1	PF00076.22	2e-31	2	2
MGP_CBAJ_P0094617	RRM_1	PF00076.22	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0094620	-	1438	-	-	- (aa)	-	-
MGP_CBAJ_T0094611	-	3315	-	MGP_CBAJ_P0094611	414 (aa)	-	-
MGP_CBAJ_T0094610	-	7904	XM_017313248	MGP_CBAJ_P0094610	431 (aa)	XP_017168737	Q8BWL5
MGP_CBAJ_T0094613	-	2166	-	MGP_CBAJ_P0094613	402 (aa)	-	-
MGP_CBAJ_T0094612	-	1626	-	MGP_CBAJ_P0094612	185 (aa)	-	-
MGP_CBAJ_T0094615	-	2236	-	MGP_CBAJ_P0094615	415 (aa)	-	-
MGP_CBAJ_T0094614	-	2128	-	MGP_CBAJ_P0094614	463 (aa)	-	-
MGP_CBAJ_T0094617	-	585	-	MGP_CBAJ_P0094617	194 (aa)	-	-
MGP_CBAJ_T0094616	-	1984	-	MGP_CBAJ_P0094616	386 (aa)	-	-
MGP_CBAJ_T0094619	-	619	-	MGP_CBAJ_P0094619	206 (aa)	-	-
MGP_CBAJ_T0094618	-	2027	-	-	- (aa)	-	-
MGP_CBAJ_T0094621	-	1753	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0035052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0035052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0035052	Rbms3	70	38.562	MGP_CBAJ_G0034128	Elavl3	63	37.931
MGP_CBAJ_G0035052	Rbms3	83	37.097	MGP_CBAJ_G0028241	Elavl4	70	36.458
MGP_CBAJ_G0035052	Rbms3	70	30.065	MGP_CBAJ_G0021507	-	57	30.065
MGP_CBAJ_G0035052	Rbms3	77	33.708	MGP_CBAJ_G0022842	Pabpc6	59	34.091
MGP_CBAJ_G0035052	Rbms3	68	43.421	MGP_CBAJ_G0025836	Celf1	53	43.421
MGP_CBAJ_G0035052	Rbms3	83	80.663	MGP_CBAJ_G0017581	Rbms2	86	66.758
MGP_CBAJ_G0035052	Rbms3	75	37.079	MGP_CBAJ_G0025044	Celf2	77	39.474
MGP_CBAJ_G0035052	Rbms3	72	40.789	MGP_CBAJ_G0023910	Celf4	68	40.789
MGP_CBAJ_G0035052	Rbms3	99	80.841	MGP_CBAJ_G0025476	Rbms1	96	71.538
MGP_CBAJ_G0035052	Rbms3	83	37.222	MGP_CBAJ_G0028108	Elavl2	69	37.209
MGP_CBAJ_G0035052	Rbms3	97	34.356	MGP_CBAJ_G0033001	Elavl1	91	34.356
MGP_CBAJ_G0035052	Rbms3	77	30.818	MGP_CBAJ_G0026528	Pabpc1l	59	30.818
MGP_CBAJ_G0035052	Rbms3	82	42.105	MGP_CBAJ_G0034556	Celf6	52	42.105
MGP_CBAJ_G0035052	Rbms3	76	39.474	MGP_CBAJ_G0027235	Celf3	91	39.474