EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0035193 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 6500 bases
Position: chrX:3032792-3039291
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0095082	RRM_1	PF00076.22	1.8e-24	1	1
MGP_CBAJ_P0095081	RRM_1	PF00076.22	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0095083	-	1055	-	MGP_CBAJ_P0095083	90 (aa)	-	-
MGP_CBAJ_T0095082	-	969	-	MGP_CBAJ_P0095082	153 (aa)	-	-
MGP_CBAJ_T0095081	-	2792	-	MGP_CBAJ_P0095081	154 (aa)	-	-
MGP_CBAJ_T0095080	-	2234	-	-	- (aa)	-	-
MGP_CBAJ_T0095085	-	721	-	-	- (aa)	-	-
MGP_CBAJ_T0095084	-	1208	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0035193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0035193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0035193	Rbm3	82	38.710	MGP_CBAJ_G0028241	Elavl4	58	31.646
MGP_CBAJ_G0035193	Rbm3	73	33.333	MGP_CBAJ_G0029760	Snrnp35	55	34.848
MGP_CBAJ_G0035193	Rbm3	90	35.385	MGP_CBAJ_G0026882	Pabpc4l	83	34.286
MGP_CBAJ_G0035193	Rbm3	100	63.529	MGP_CBAJ_G0017221	Cirbp	99	60.588
MGP_CBAJ_G0035193	Rbm3	90	39.326	MGP_CBAJ_G0017227	Dazap1	78	46.032
MGP_CBAJ_G0035193	Rbm3	77	55.072	MGP_CBAJ_G0033470	-	54	54.878
MGP_CBAJ_G0035193	Rbm3	99	35.955	MGP_CBAJ_G0030638	Tia1	70	41.333
MGP_CBAJ_G0035193	Rbm3	80	36.709	MGP_CBAJ_G0029449	Hnrnpd	70	34.667
MGP_CBAJ_G0035193	Rbm3	82	38.710	MGP_CBAJ_G0028108	Elavl2	63	32.911
MGP_CBAJ_G0035193	Rbm3	87	40.000	MGP_CBAJ_G0028401	Pabpc4	68	37.500
MGP_CBAJ_G0035193	Rbm3	82	43.243	MGP_CBAJ_G0018650	Msi2	61	42.857
MGP_CBAJ_G0035193	Rbm3	78	55.714	MGP_CBAJ_G0035395	Rbmx	79	56.790