EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0035331 (Gene tree)
Gene ID
-
Gene Symbol
Smarca1
Alias
5730494M04Rik|Snf2l
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Minus strand
Length
86145 bases
Position
chrX:45181412-45267556
Accession
1935127
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0095495ResIIIPF04851.154.3e-1211
MGP_CBAJ_P0095494ResIIIPF04851.151.1e-1111
MGP_CBAJ_P0095492ResIIIPF04851.151.8e-1111
MGP_CBAJ_P0095491ResIIIPF04851.151.8e-1111
MGP_CBAJ_P0095493ResIIIPF04851.151.8e-1111
MGP_CBAJ_P0095491DEADPF00270.291.2e-0611
MGP_CBAJ_P0095493DEADPF00270.291.2e-0611
MGP_CBAJ_P0095492DEADPF00270.291.3e-0611
MGP_CBAJ_P0095495DEADPF00270.292.4e-0611
MGP_CBAJ_P0095494DEADPF00270.293.2e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0095491-4024XM_006541563MGP_CBAJ_P00954911046 (aa)XP_006541626Q6PGB8
MGP_CBAJ_T0095492-3991-MGP_CBAJ_P00954921062 (aa)--
MGP_CBAJ_T0095493-4798-MGP_CBAJ_P00954931046 (aa)--
MGP_CBAJ_T0095494-2304-MGP_CBAJ_P0095494768 (aa)--
MGP_CBAJ_T0095495-1965-MGP_CBAJ_P0095495381 (aa)--
MGP_CBAJ_T0095496-360-MGP_CBAJ_P0095496117 (aa)--
MGP_CBAJ_T0095497-409--- (aa)--
Gene Model
Click here to download MGP_CBAJ_G0035331's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0035331's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0035331Smarca17130.490MGP_CBAJ_G0020378Ercc6l28230.353
MGP_CBAJ_G0035331Smarca16831.661MGP_CBAJ_G0027728Rad54b6232.212
MGP_CBAJ_G0035331Smarca16132.031MGP_CBAJ_G0028281Rad54l6633.267
MGP_CBAJ_G0035331Smarca17245.247MGP_CBAJ_G0024806Hells6547.410
MGP_CBAJ_G0035331Smarca19382.454MGP_CBAJ_G0033483Smarca59382.454
MGP_CBAJ_G0035331Smarca17542.044MGP_CBAJ_G0027320Chd1l6243.419

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