EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0035332 (Gene tree)
Gene ID
-
Gene Symbol
Ocrl
Alias
9530014D17Rik|BB143339|OCRL1
Full Name
oculocerebrorenal syndrome of Lowe
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Plus strand
Length
59908 bases
Position
chrX:45291359-45351266
Accession
109589
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0095499Exo_endo_phosPF03372.233.3e-1511
MGP_CBAJ_P0095502Exo_endo_phosPF03372.234e-1511
MGP_CBAJ_P0095498Exo_endo_phosPF03372.234.2e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0095498-5253XM_011251008MGP_CBAJ_P0095498900 (aa)XP_011249310Q6NVF0
MGP_CBAJ_T0095499-3210-MGP_CBAJ_P0095499727 (aa)--
MGP_CBAJ_T0095504-799-MGP_CBAJ_P0095504265 (aa)--
MGP_CBAJ_T0095502-4953-MGP_CBAJ_P0095502887 (aa)--
MGP_CBAJ_T0095503-727--- (aa)--
MGP_CBAJ_T0095500-2930--- (aa)--
MGP_CBAJ_T0095501-2839--- (aa)--
Gene Model
Click here to download MGP_CBAJ_G0035332's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0035332's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0035332Ocrl8251.578MGP_CBAJ_G0028415Inpp5b7151.748
MGP_CBAJ_G0035332Ocrl5032.039MGP_CBAJ_G0022808Synj25832.653

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us