EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0035732 (Gene tree)
Gene ID: -
Gene Symbol: Nxf2
Alias: 4930455N06Rik|NXF2|Nxf-b
Full Name: nuclear RNA export factor 2
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 25543 bases
Position: chrX:140137858-140163400
Accession: 1933192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0096908	Tap-RNA_bind	PF09162.10	1.8e-37	1	1
MGP_CBAJ_P0096906	Tap-RNA_bind	PF09162.10	1.8e-37	1	1
MGP_CBAJ_P0096907	Tap-RNA_bind	PF09162.10	1.9e-37	1	1
MGP_CBAJ_P0096908	TAP_C	PF03943.13	4.5e-22	1	1
MGP_CBAJ_P0096906	TAP_C	PF03943.13	4.6e-22	1	1
MGP_CBAJ_P0096907	TAP_C	PF03943.13	4.7e-22	1	1
MGP_CBAJ_P0096908	NTF2	PF02136.20	6.2e-10	1	1
MGP_CBAJ_P0096906	NTF2	PF02136.20	6.5e-10	1	1
MGP_CBAJ_P0096907	NTF2	PF02136.20	4.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0096907	-	2393	-	MGP_CBAJ_P0096907	691 (aa)	-	-
MGP_CBAJ_T0096906	-	2375	-	MGP_CBAJ_P0096906	685 (aa)	-	-
MGP_CBAJ_T0096905	-	1814	-	-	- (aa)	-	-
MGP_CBAJ_T0096908	-	2316	-	MGP_CBAJ_P0096908	671 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0035732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0035732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0035732	Nxf2	82	54.887	MGP_CBAJ_G0024515	Nxf1	98	56.504
MGP_CBAJ_G0035732	Nxf2	90	36.139	MGP_CBAJ_G0035748	Nxf3	89	48.188
MGP_CBAJ_G0035732	Nxf2	90	43.387	MGP_CBAJ_G0035737	Nxf7	91	53.358