EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0016187 (Gene tree)
Gene ID: -
Gene Symbol: Hdlbp
Alias: 1110005P14Rik|AA960365|AI118566|D1Ertd101e
Full Name: high density lipoprotein (HDL) binding protein
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 73993 bases
Position: chr1:90819249-90893241
Accession: 99256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	1	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	2	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	3	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	4	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	5	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	6	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	7	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	8	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	9	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	10	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	11	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	12	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	13	14
MGP_DBA2J_P0021282	KH_1	PF00013.29	5.3e-188	14	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	1	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	2	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	3	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	4	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	5	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	6	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	7	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	8	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	9	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	10	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	11	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	12	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	13	14
MGP_DBA2J_P0021283	KH_1	PF00013.29	5.3e-188	14	14
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	1	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	2	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	3	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	4	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	5	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	6	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	7	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	8	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	9	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	10	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	11	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	12	13
MGP_DBA2J_P0021284	KH_1	PF00013.29	1.1e-176	13	13
MGP_DBA2J_P0021287	KH_1	PF00013.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0021288	-	671	-	MGP_DBA2J_P0021288	141 (aa)	-	-
MGP_DBA2J_T0021289	-	850	-	MGP_DBA2J_P0021289	129 (aa)	-	-
MGP_DBA2J_T0021292	-	3216	-	-	- (aa)	-	-
MGP_DBA2J_T0021282	-	6231	XM_006529074	MGP_DBA2J_P0021282	1268 (aa)	XP_006529137	Q8VDJ3
MGP_DBA2J_T0021283	-	4427	-	MGP_DBA2J_P0021283	1268 (aa)	-	-
MGP_DBA2J_T0021284	-	3808	-	MGP_DBA2J_P0021284	1199 (aa)	-	-
MGP_DBA2J_T0021285	-	2172	-	-	- (aa)	-	-
MGP_DBA2J_T0021286	-	528	-	MGP_DBA2J_P0021286	22 (aa)	-	-
MGP_DBA2J_T0021287	-	740	-	MGP_DBA2J_P0021287	178 (aa)	-	-
MGP_DBA2J_T0021291	-	341	-	MGP_DBA2J_P0021291	22 (aa)	-	-
MGP_DBA2J_T0021290	-	630	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0016187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0016187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0016187	Hdlbp	94	50.276	MGP_DBA2J_G0035857	Gm382	95	50.276
MGP_DBA2J_G0016187	Hdlbp	91	46.008	MGP_DBA2J_G0035858	4921511C20Rik	100	46.008