EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0016260 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 14145 bases
Position: chr1:118945655-118959799
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0021611	ResIII	PF04851.15	4.5e-06	1	1
MGP_DBA2J_P0021611	DEAD	PF00270.29	1.7e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0021613	-	512	-	MGP_DBA2J_P0021613	170 (aa)	-	-
MGP_DBA2J_T0021612	-	622	-	-	- (aa)	-	-
MGP_DBA2J_T0021611	-	2258	XM_006529794	MGP_DBA2J_P0021611	660 (aa)	XP_006529857	Q8K363
MGP_DBA2J_T0021614	-	451	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0016260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0016260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0016260	Ddx18	52	33.333	MGP_DBA2J_G0021909	Ddx17	53	33.333
MGP_DBA2J_G0016260	Ddx18	64	32.294	MGP_DBA2J_G0029822	Ddx54	50	32.366
MGP_DBA2J_G0016260	Ddx18	53	33.144	MGP_DBA2J_G0016389	Ddx59	55	33.144
MGP_DBA2J_G0016260	Ddx18	55	38.525	MGP_DBA2J_G0031233	Ddx47	88	37.705
MGP_DBA2J_G0016260	Ddx18	61	38.462	MGP_DBA2J_G0026739	Ddx27	53	38.221
MGP_DBA2J_G0016260	Ddx18	53	33.155	MGP_DBA2J_G0016762	D1Pas1	56	33.155
MGP_DBA2J_G0016260	Ddx18	68	36.192	MGP_DBA2J_G0029913	Ddx55	79	36.042
MGP_DBA2J_G0016260	Ddx18	50	30.628	MGP_DBA2J_G0029704	Ddx51	59	31.070
MGP_DBA2J_G0016260	Ddx18	50	34.111	MGP_DBA2J_G0020434	Ddx41	54	34.111
MGP_DBA2J_G0016260	Ddx18	56	36.148	MGP_DBA2J_G0033520	Ddx49	92	38.066
MGP_DBA2J_G0016260	Ddx18	51	30.769	MGP_DBA2J_G0033656	Ddx39	81	30.312
MGP_DBA2J_G0016260	Ddx18	57	34.351	MGP_DBA2J_G0017141	Ddx50	51	34.351
MGP_DBA2J_G0016260	Ddx18	65	36.327	MGP_DBA2J_G0025378	Ddx31	72	36.327
MGP_DBA2J_G0016260	Ddx18	55	32.990	MGP_DBA2J_G0018696	Ddx52	68	31.935
MGP_DBA2J_G0016260	Ddx18	66	46.241	MGP_DBA2J_G0034620	Ddx10	50	46.241
MGP_DBA2J_G0016260	Ddx18	53	33.155	MGP_DBA2J_G0035380	Ddx3x	56	33.422
MGP_DBA2J_G0016260	Ddx18	53	32.386	MGP_DBA2J_G0019145	Ddx5	74	31.699
MGP_DBA2J_G0016260	Ddx18	50	32.628	MGP_DBA2J_G0018381	Eif4a1	90	31.830
MGP_DBA2J_G0016260	Ddx18	56	34.974	MGP_DBA2J_G0034880	Ddx43	55	34.974