EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0017141 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 37744 bases
Position: chr10:59428693-59466436
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0025267	GUCT	PF08152.12	4.8e-28	1	1
MGP_DBA2J_P0025267	ResIII	PF04851.15	5.8e-10	1	1
MGP_DBA2J_P0025267	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0025267	-	2527	XM_006514345	MGP_DBA2J_P0025267	734 (aa)	XP_006514408	Q99MJ9

Gene Model

Click here to download MGP_DBA2J_G0017141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0017141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0017141	Ddx50	50	31.367	MGP_DBA2J_G0022512	Eif4a2	90	30.904
MGP_DBA2J_G0017141	Ddx50	50	32.353	MGP_DBA2J_G0019310	Eif4a3	86	32.353
MGP_DBA2J_G0017141	Ddx50	50	33.962	MGP_DBA2J_G0021909	Ddx17	55	33.962
MGP_DBA2J_G0017141	Ddx50	51	34.351	MGP_DBA2J_G0016260	Ddx18	57	34.351
MGP_DBA2J_G0017141	Ddx50	50	32.267	MGP_DBA2J_G0018381	Eif4a1	88	31.720
MGP_DBA2J_G0017141	Ddx50	56	34.272	MGP_DBA2J_G0026739	Ddx27	52	34.129
MGP_DBA2J_G0017141	Ddx50	54	31.204	MGP_DBA2J_G0031233	Ddx47	94	30.175
MGP_DBA2J_G0017141	Ddx50	82	66.446	MGP_DBA2J_G0017140	Ddx21	71	64.217