EuRBPDB

Description

Ensembl ID: MGP_DBA2J_G0017794 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|AI447519|MAZR|Mazr|POZ-AT hook-zinc finger protein|Patz|Zfp278|Zfp278GN|mazr
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 20750 bases
Position: chr11:123596-144345
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0027481	zf-C2H2	PF00096.26	3.9e-26	1	5
MGP_DBA2J_P0027481	zf-C2H2	PF00096.26	3.9e-26	2	5
MGP_DBA2J_P0027481	zf-C2H2	PF00096.26	3.9e-26	3	5
MGP_DBA2J_P0027481	zf-C2H2	PF00096.26	3.9e-26	4	5
MGP_DBA2J_P0027481	zf-C2H2	PF00096.26	3.9e-26	5	5
MGP_DBA2J_P0027480	zf-C2H2	PF00096.26	5e-20	1	4
MGP_DBA2J_P0027480	zf-C2H2	PF00096.26	5e-20	2	4
MGP_DBA2J_P0027480	zf-C2H2	PF00096.26	5e-20	3	4
MGP_DBA2J_P0027480	zf-C2H2	PF00096.26	5e-20	4	4
MGP_DBA2J_P0027479	zf-C2H2	PF00096.26	2.2e-15	1	3
MGP_DBA2J_P0027479	zf-C2H2	PF00096.26	2.2e-15	2	3
MGP_DBA2J_P0027479	zf-C2H2	PF00096.26	2.2e-15	3	3
MGP_DBA2J_P0027481	zf-met	PF12874.7	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0027479	-	2965	-	MGP_DBA2J_P0027479	537 (aa)	-	-
MGP_DBA2J_T0027478	-	1904	-	MGP_DBA2J_P0027478	102 (aa)	-	-
MGP_DBA2J_T0027475	-	798	NR_045109	-	- (aa)	-	-
MGP_DBA2J_T0027477	-	844	-	-	- (aa)	-	-
MGP_DBA2J_T0027476	-	1853	-	-	- (aa)	-	-
MGP_DBA2J_T0027484	-	652	-	-	- (aa)	-	-
MGP_DBA2J_T0027485	-	495	-	MGP_DBA2J_P0027485	70 (aa)	-	-
MGP_DBA2J_T0027480	-	3118	-	MGP_DBA2J_P0027480	641 (aa)	-	-
MGP_DBA2J_T0027481	-	2064	-	MGP_DBA2J_P0027481	687 (aa)	-	-
MGP_DBA2J_T0027482	-	1249	-	-	- (aa)	-	-
MGP_DBA2J_T0027483	-	456	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0017794	Patz1	82	37.895	MGP_DBA2J_G0023824	Zbtb14	90	38.889