EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0018043 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 9646 bases
Position: chr11:45841706-45851351
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0028540	MMR_HSR1	PF01926.23	5.6e-05	1	1
MGP_DBA2J_P0028539	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0028539	-	2259	-	MGP_DBA2J_P0028539	409 (aa)	-	-
MGP_DBA2J_T0028538	-	3832	-	-	- (aa)	-	-
MGP_DBA2J_T0028540	-	1213	-	MGP_DBA2J_P0028540	288 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0018043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0018043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0018043	Irgm1	79	36.864	MGP_DBA2J_G0024291	Gm4951	77	33.013
MGP_DBA2J_G0018043	Irgm1	77	32.432	MGP_DBA2J_G0024292	Gm4841	97	32.432
MGP_DBA2J_G0018043	Irgm1	93	33.696	MGP_DBA2J_G0024294	Iigp1	79	32.515
MGP_DBA2J_G0018043	Irgm1	89	31.937	MGP_DBA2J_G0018050	Ifi47	91	31.937
MGP_DBA2J_G0018043	Irgm1	75	33.028	MGP_DBA2J_G0024293	F830016B08Rik	78	33.028
MGP_DBA2J_G0018043	Irgm1	83	62.185	MGP_DBA2J_G0018182	Irgm2	92	50.135
MGP_DBA2J_G0018043	Irgm1	83	38.776	MGP_DBA2J_G0018047	Gm5431	70	45.714
MGP_DBA2J_G0018043	Irgm1	82	39.095	MGP_DBA2J_G0018049	Tgtp1	72	36.667
MGP_DBA2J_G0018043	Irgm1	76	35.169	MGP_DBA2J_G0031652	Irgc1	71	30.183