EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0018088 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 14922 bases
Position: chr11:47943265-47958186
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	1	11
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	2	11
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	3	11
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	4	11
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	5	11
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	6	11
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	7	11
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	8	11
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	9	11
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	10	11
MGP_DBA2J_P0028701	zf-C2H2	PF00096.26	7.6e-63	11	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	1	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	2	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	3	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	4	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	5	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	6	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	7	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	8	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	9	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	10	11
MGP_DBA2J_P0028699	zf-C2H2	PF00096.26	7.7e-63	11	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	1	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	2	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	3	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	4	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	5	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	6	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	7	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	8	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	9	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	10	11
MGP_DBA2J_P0028700	zf-C2H2	PF00096.26	7.7e-63	11	11
MGP_DBA2J_P0028701	zf-met	PF12874.7	0.00058	1	1
MGP_DBA2J_P0028699	zf-met	PF12874.7	0.00059	1	1
MGP_DBA2J_P0028700	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0028699	-	2059	XM_006533208	MGP_DBA2J_P0028699	536 (aa)	XP_006533271	Q5NCH5
MGP_DBA2J_T0028704	-	606	-	-	- (aa)	-	-
MGP_DBA2J_T0028702	-	579	-	-	- (aa)	-	-
MGP_DBA2J_T0028703	-	722	-	MGP_DBA2J_P0028703	122 (aa)	-	-
MGP_DBA2J_T0028700	-	2090	-	MGP_DBA2J_P0028700	536 (aa)	-	-
MGP_DBA2J_T0028701	-	2093	-	MGP_DBA2J_P0028701	535 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0018088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0018088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0018088	Zfp454	69	60.345	MGP_DBA2J_G0030998	Zfp637	80	55.208
MGP_DBA2J_G0018088	Zfp454	68	53.509	MGP_DBA2J_G0018421	Bcl6b	55	53.509
MGP_DBA2J_G0018088	Zfp454	99	46.361	MGP_DBA2J_G0023084	Zfp945	99	46.479
MGP_DBA2J_G0018088	Zfp454	98	49.008	MGP_DBA2J_G0031639	Zfp112	98	49.008
MGP_DBA2J_G0018088	Zfp454	76	42.982	MGP_DBA2J_G0024436	Zfp236	63	42.697
MGP_DBA2J_G0018088	Zfp454	70	41.854	MGP_DBA2J_G0023091	Zscan10	75	44.554
MGP_DBA2J_G0018088	Zfp454	66	42.424	MGP_DBA2J_G0028860	Zbtb17	55	43.322
MGP_DBA2J_G0018088	Zfp454	69	37.600	MGP_DBA2J_G0033798	Zfp319	91	37.989
MGP_DBA2J_G0018088	Zfp454	72	57.803	MGP_DBA2J_G0031811	Zfp420	98	59.532
MGP_DBA2J_G0018088	Zfp454	98	46.667	MGP_DBA2J_G0034293	Zfp872	99	46.667
MGP_DBA2J_G0018088	Zfp454	98	50.836	MGP_DBA2J_G0031644	Zfp108	99	50.418
MGP_DBA2J_G0018088	Zfp454	98	50.523	MGP_DBA2J_G0031647	Zfp94	97	50.523
MGP_DBA2J_G0018088	Zfp454	73	66.667	MGP_DBA2J_G0031646	Zfp61	60	66.667
MGP_DBA2J_G0018088	Zfp454	99	48.193	MGP_DBA2J_G0031641	Zfp114	99	48.193
MGP_DBA2J_G0018088	Zfp454	98	51.220	MGP_DBA2J_G0031640	Zfp235	78	60.000
MGP_DBA2J_G0018088	Zfp454	99	52.464	MGP_DBA2J_G0031642	Zfp111	99	52.464
MGP_DBA2J_G0018088	Zfp454	68	42.262	MGP_DBA2J_G0029656	Gfi1	100	45.794
MGP_DBA2J_G0018088	Zfp454	98	50.142	MGP_DBA2J_G0020547	Zfp748	100	50.142
MGP_DBA2J_G0018088	Zfp454	98	43.782	MGP_DBA2J_G0026725	Zfp334	99	44.615
MGP_DBA2J_G0018088	Zfp454	99	53.604	MGP_DBA2J_G0021844	Zfp251	95	51.948
MGP_DBA2J_G0018088	Zfp454	99	49.080	MGP_DBA2J_G0020529	Rslcan18	87	49.080
MGP_DBA2J_G0018088	Zfp454	69	47.645	MGP_DBA2J_G0031748	Zfp974	88	47.645
MGP_DBA2J_G0018088	Zfp454	67	42.623	MGP_DBA2J_G0031396	Zfp865	80	36.486
MGP_DBA2J_G0018088	Zfp454	65	47.423	MGP_DBA2J_G0029321	Zbtb49	63	50.000
MGP_DBA2J_G0018088	Zfp454	100	49.851	MGP_DBA2J_G0023064	Zfp51	94	64.151
MGP_DBA2J_G0018088	Zfp454	99	49.315	MGP_DBA2J_G0023062	Zfp677	99	49.315
MGP_DBA2J_G0018088	Zfp454	98	48.116	MGP_DBA2J_G0018235	Zfp867	96	49.583
MGP_DBA2J_G0018088	Zfp454	67	51.309	MGP_DBA2J_G0031388	Zfp628	60	49.451
MGP_DBA2J_G0018088	Zfp454	98	48.828	MGP_DBA2J_G0033957	Zfp1	99	48.828
MGP_DBA2J_G0018088	Zfp454	98	52.692	MGP_DBA2J_G0020530	Zfp759	100	52.692
MGP_DBA2J_G0018088	Zfp454	82	36.599	MGP_DBA2J_G0030518	Repin1	92	35.252
MGP_DBA2J_G0018088	Zfp454	68	38.320	MGP_DBA2J_G0018185	Zfp672	90	42.029
MGP_DBA2J_G0018088	Zfp454	68	45.745	MGP_DBA2J_G0026763	Zfp64	73	35.125
MGP_DBA2J_G0018088	Zfp454	98	41.509	MGP_DBA2J_G0033586	Zfp882	99	44.110
MGP_DBA2J_G0018088	Zfp454	70	35.714	MGP_DBA2J_G0031677	Zfp574	88	37.500
MGP_DBA2J_G0018088	Zfp454	87	48.199	MGP_DBA2J_G0031941	Zfp715	61	57.778
MGP_DBA2J_G0018088	Zfp454	68	38.571	MGP_DBA2J_G0030651	Prdm5	78	38.571
MGP_DBA2J_G0018088	Zfp454	68	51.095	MGP_DBA2J_G0032855	Zfp768	51	50.523
MGP_DBA2J_G0018088	Zfp454	70	47.410	MGP_DBA2J_G0032859	-	82	47.410
MGP_DBA2J_G0018088	Zfp454	99	44.019	MGP_DBA2J_G0032858	E430018J23Rik	89	45.385
MGP_DBA2J_G0018088	Zfp454	65	36.493	MGP_DBA2J_G0031399	Zfp784	71	36.493
MGP_DBA2J_G0018088	Zfp454	100	55.405	MGP_DBA2J_G0026296	Zfp661	98	55.405
MGP_DBA2J_G0018088	Zfp454	69	39.130	MGP_DBA2J_G0018821	Zfp652	56	38.596