EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0018696 (Gene tree)
Gene ID: -
Gene Symbol: Ddx52
Alias: 2700029C06Rik|ROK1|Rok1
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 21485 bases
Position: chr11:81669803-81691287
Accession: 1925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0031095	ResIII	PF04851.15	9.9e-06	1	1
MGP_DBA2J_P0031095	DEAD	PF00270.29	5.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0031095	-	3194	-	MGP_DBA2J_P0031095	598 (aa)	-	Q8K301
MGP_DBA2J_T0031096	-	553	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0018696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0018696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0018696	Ddx52	58	30.900	MGP_DBA2J_G0029704	Ddx51	64	30.900
MGP_DBA2J_G0018696	Ddx52	69	34.135	MGP_DBA2J_G0034880	Ddx43	63	34.135
MGP_DBA2J_G0018696	Ddx52	68	30.733	MGP_DBA2J_G0020434	Ddx41	65	31.026
MGP_DBA2J_G0018696	Ddx52	61	30.081	MGP_DBA2J_G0033520	Ddx49	76	30.081
MGP_DBA2J_G0018696	Ddx52	60	32.044	MGP_DBA2J_G0022512	Eif4a2	90	30.240
MGP_DBA2J_G0018696	Ddx52	61	30.597	MGP_DBA2J_G0017857	Ddx56	80	33.493
MGP_DBA2J_G0018696	Ddx52	60	31.768	MGP_DBA2J_G0018381	Eif4a1	87	31.768
MGP_DBA2J_G0018696	Ddx52	70	32.045	MGP_DBA2J_G0035380	Ddx3x	61	32.530
MGP_DBA2J_G0018696	Ddx52	58	33.428	MGP_DBA2J_G0031233	Ddx47	83	32.011
MGP_DBA2J_G0018696	Ddx52	68	31.935	MGP_DBA2J_G0016260	Ddx18	55	32.990
MGP_DBA2J_G0018696	Ddx52	62	30.750	MGP_DBA2J_G0029913	Ddx55	63	30.750
MGP_DBA2J_G0018696	Ddx52	68	30.456	MGP_DBA2J_G0021909	Ddx17	62	30.843
MGP_DBA2J_G0018696	Ddx52	66	32.530	MGP_DBA2J_G0016762	D1Pas1	61	32.530
MGP_DBA2J_G0018696	Ddx52	70	30.222	MGP_DBA2J_G0022133	Ddx23	54	30.243
MGP_DBA2J_G0018696	Ddx52	60	41.071	MGP_DBA2J_G0019437	Ddx1	55	41.071
MGP_DBA2J_G0018696	Ddx52	66	31.204	MGP_DBA2J_G0019145	Ddx5	62	35.345
MGP_DBA2J_G0018696	Ddx52	66	34.069	MGP_DBA2J_G0020762	Ddx4	57	34.069
MGP_DBA2J_G0018696	Ddx52	73	32.648	MGP_DBA2J_G0016389	Ddx59	64	33.741