EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0018753 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 6378 bases
Position: chr11:85816784-85823161
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0031354	RRM_1	PF00076.22	6.2e-34	1	2
MGP_DBA2J_P0031354	RRM_1	PF00076.22	6.2e-34	2	2
MGP_DBA2J_P0031353	RRM_1	PF00076.22	2.4e-33	1	2
MGP_DBA2J_P0031353	RRM_1	PF00076.22	2.4e-33	2	2
MGP_DBA2J_P0031356	RRM_1	PF00076.22	2.6e-33	1	2
MGP_DBA2J_P0031356	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0031359	-	758	-	-	- (aa)	-	-
MGP_DBA2J_T0031358	-	401	-	MGP_DBA2J_P0031358	57 (aa)	-	-
MGP_DBA2J_T0031357	-	895	-	MGP_DBA2J_P0031357	105 (aa)	-	-
MGP_DBA2J_T0031356	-	1209	-	MGP_DBA2J_P0031356	253 (aa)	-	-
MGP_DBA2J_T0031355	-	647	-	-	- (aa)	-	-
MGP_DBA2J_T0031354	-	2948	-	MGP_DBA2J_P0031354	201 (aa)	-	-
MGP_DBA2J_T0031353	-	5357	-	MGP_DBA2J_P0031353	248 (aa)	-	Q6PDM2

Gene Model

Click here to download MGP_DBA2J_G0018753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0018753's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0018753	Srsf1	79	79.762	MGP_DBA2J_G0029778	Srsf9	78	70.330
MGP_DBA2J_G0018753	Srsf1	85	44.318	MGP_DBA2J_G0019724	Srsf5	96	51.020
MGP_DBA2J_G0018753	Srsf1	82	42.857	MGP_DBA2J_G0026645	Srsf6	58	40.670