EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0018758 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 380242 bases
Position: chr11:86117428-86497669
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0031375	RRM_1	PF00076.22	6.3e-34	1	2
MGP_DBA2J_P0031375	RRM_1	PF00076.22	6.3e-34	2	2
MGP_DBA2J_P0031376	RRM_1	PF00076.22	6.5e-34	1	2
MGP_DBA2J_P0031376	RRM_1	PF00076.22	6.5e-34	2	2
MGP_DBA2J_P0031379	RRM_1	PF00076.22	3.9e-22	1	1
MGP_DBA2J_P0031380	RRM_1	PF00076.22	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0031375	-	5875	XM_006534432	MGP_DBA2J_P0031375	328 (aa)	XP_006534495	Q920Q6
MGP_DBA2J_T0031377	-	1749	-	-	- (aa)	-	-
MGP_DBA2J_T0031376	-	1857	-	MGP_DBA2J_P0031376	346 (aa)	-	-
MGP_DBA2J_T0031380	-	665	-	MGP_DBA2J_P0031380	157 (aa)	-	-
MGP_DBA2J_T0031381	-	626	-	-	- (aa)	-	-
MGP_DBA2J_T0031379	-	405	-	MGP_DBA2J_P0031379	113 (aa)	-	-
MGP_DBA2J_T0031378	-	2538	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0018758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0018758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0018758	Msi2	100	35.398	MGP_DBA2J_G0028942	Tardbp	79	31.818
MGP_DBA2J_G0018758	Msi2	60	33.824	MGP_DBA2J_G0019816	Slirp	70	33.824
MGP_DBA2J_G0018758	Msi2	99	42.400	MGP_DBA2J_G0017333	Dazap1	92	49.462
MGP_DBA2J_G0018758	Msi2	61	42.857	MGP_DBA2J_G0035549	Rbmx	88	45.205
MGP_DBA2J_G0018758	Msi2	70	31.250	MGP_DBA2J_G0028258	Elavl2	72	32.632
MGP_DBA2J_G0018758	Msi2	61	42.857	MGP_DBA2J_G0035350	Rbm3	82	43.243
MGP_DBA2J_G0018758	Msi2	84	30.208	MGP_DBA2J_G0028389	Elavl4	78	30.088
MGP_DBA2J_G0018758	Msi2	100	90.323	MGP_DBA2J_G0029782	Msi1	99	75.665
MGP_DBA2J_G0018758	Msi2	100	54.867	MGP_DBA2J_G0029595	Hnrnpdl	78	41.634
MGP_DBA2J_G0018758	Msi2	100	53.982	MGP_DBA2J_G0029593	Hnrnpd	100	72.000
MGP_DBA2J_G0018758	Msi2	99	41.228	MGP_DBA2J_G0020459	Hnrnpa0	59	41.989
MGP_DBA2J_G0018758	Msi2	50	33.333	MGP_DBA2J_G0015878	Boll	65	32.857
MGP_DBA2J_G0018758	Msi2	100	44.348	MGP_DBA2J_G0030552	Hnrnpa2b1	56	48.193
MGP_DBA2J_G0018758	Msi2	61	41.429	MGP_DBA2J_G0017327	Cirbp	88	43.243
MGP_DBA2J_G0018758	Msi2	100	52.212	MGP_DBA2J_G0018102	Hnrnpab	70	48.039
MGP_DBA2J_G0018758	Msi2	80	34.074	MGP_DBA2J_G0026785	Rbm38	70	38.095