EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0018999 (Gene tree)
Gene ID: -
Gene Symbol: Rab5c
Alias: AI326010|Rab5C|Rabl
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 23248 bases
Position: chr11:98702444-98725691
Accession: 105306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0032194	MMR_HSR1	PF01926.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0032194	-	1915	XM_006532586	MGP_DBA2J_P0032194	216 (aa)	XP_006532649	P35278
MGP_DBA2J_T0032195	-	1967	-	MGP_DBA2J_P0032195	234 (aa)	-	-
MGP_DBA2J_T0032196	-	412	-	MGP_DBA2J_P0032196	83 (aa)	-	-
MGP_DBA2J_T0032197	-	441	-	MGP_DBA2J_P0032197	34 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0018999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0018999's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0018999	Rab5c	83	30.000	MGP_DBA2J_G0027508	Nras	99	33.333
MGP_DBA2J_G0018999	Rab5c	91	46.939	MGP_DBA2J_G0023806	Rab31	98	46.939
MGP_DBA2J_G0018999	Rab5c	75	36.585	MGP_DBA2J_G0035672	Rab39b	77	36.585
MGP_DBA2J_G0018999	Rab5c	90	41.262	MGP_DBA2J_G0034756	Rab11a	88	49.630
MGP_DBA2J_G0018999	Rab5c	86	38.806	MGP_DBA2J_G0023815	Rab12	75	36.000
MGP_DBA2J_G0018999	Rab5c	90	47.423	MGP_DBA2J_G0026792	Rab22a	98	47.423
MGP_DBA2J_G0018999	Rab5c	73	31.875	MGP_DBA2J_G0018600	Rab34	62	31.875
MGP_DBA2J_G0018999	Rab5c	78	32.544	MGP_DBA2J_G0031300	Kras	98	30.102
MGP_DBA2J_G0018999	Rab5c	81	35.227	MGP_DBA2J_G0015746	Rab23	74	35.227
MGP_DBA2J_G0018999	Rab5c	75	45.062	MGP_DBA2J_G0023961	Rab18	78	45.062
MGP_DBA2J_G0018999	Rab5c	78	42.012	MGP_DBA2J_G0032333	Rab30	83	42.012
MGP_DBA2J_G0018999	Rab5c	81	33.702	MGP_DBA2J_G0033035	Hras	94	33.702
MGP_DBA2J_G0018999	Rab5c	89	40.206	MGP_DBA2J_G0021123	Rab2b	90	40.206
MGP_DBA2J_G0018999	Rab5c	73	35.625	MGP_DBA2J_G0017188	Rab36	60	35.625
MGP_DBA2J_G0018999	Rab5c	55	31.967	MGP_DBA2J_G0030921	Arl8b	62	31.967
MGP_DBA2J_G0018999	Rab5c	89	34.848	MGP_DBA2J_G0036077	Rab9	97	34.848
MGP_DBA2J_G0018999	Rab5c	94	41.379	MGP_DBA2J_G0035006	Rab6b	98	41.379
MGP_DBA2J_G0018999	Rab5c	77	42.442	MGP_DBA2J_G0030824	Rab7	90	47.727
MGP_DBA2J_G0018999	Rab5c	98	40.845	MGP_DBA2J_G0019203	Rab37	95	40.845
MGP_DBA2J_G0018999	Rab5c	78	32.544	MGP_DBA2J_G0031406	Rasl2-9	77	32.544
MGP_DBA2J_G0018999	Rab5c	81	31.250	MGP_DBA2J_G0029171	Rheb	93	31.250
MGP_DBA2J_G0018999	Rab5c	89	44.330	MGP_DBA2J_G0024526	Rab1b	96	44.330
MGP_DBA2J_G0018999	Rab5c	89	37.113	MGP_DBA2J_G0029788	Rab35	96	37.436
MGP_DBA2J_G0018999	Rab5c	75	48.447	MGP_DBA2J_G0023366	Rab11b	74	48.447
MGP_DBA2J_G0018999	Rab5c	89	43.590	MGP_DBA2J_G0017903	Rab1a	95	43.590
MGP_DBA2J_G0018999	Rab5c	89	36.318	MGP_DBA2J_G0035495	Rab33a	85	36.318
MGP_DBA2J_G0018999	Rab5c	89	35.859	MGP_DBA2J_G0035918	Rab9b	97	35.859
MGP_DBA2J_G0018999	Rab5c	86	39.785	MGP_DBA2J_G0025495	Rab14	89	40.741
MGP_DBA2J_G0018999	Rab5c	89	35.784	MGP_DBA2J_G0019695	Rab15	95	35.784
MGP_DBA2J_G0018999	Rab5c	71	35.948	MGP_DBA2J_G0022070	Rabl2	67	35.948
MGP_DBA2J_G0018999	Rab5c	97	86.124	MGP_DBA2J_G0017715	Rab5b	97	86.124
MGP_DBA2J_G0018999	Rab5c	93	37.379	MGP_DBA2J_G0027024	Rab33b	89	37.379
MGP_DBA2J_G0018999	Rab5c	90	38.974	MGP_DBA2J_G0027854	Rab2a	92	38.974
MGP_DBA2J_G0018999	Rab5c	100	87.500	MGP_DBA2J_G0023717	Rab5a	100	87.500
MGP_DBA2J_G0018999	Rab5c	55	31.707	MGP_DBA2J_G0016365	Arl8a	62	31.707
MGP_DBA2J_G0018999	Rab5c	81	44.000	MGP_DBA2J_G0032392	Rab6a	84	44.000
MGP_DBA2J_G0018999	Rab5c	89	41.089	MGP_DBA2J_G0027227	Rab25	93	41.089