EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0019145 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 9741 bases
Position: chr11:104881815-104891555
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0032896	P68HR	PF08061.11	7.1e-32	1	2
MGP_DBA2J_P0032896	P68HR	PF08061.11	7.1e-32	2	2
MGP_DBA2J_P0032896	DEAD	PF00270.29	2.7e-47	1	1
MGP_DBA2J_P0032903	DEAD	PF00270.29	1.5e-15	1	1
MGP_DBA2J_P0032904	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0032904	-	831	-	MGP_DBA2J_P0032904	167 (aa)	-	-
MGP_DBA2J_T0032903	-	861	-	MGP_DBA2J_P0032903	182 (aa)	-	-
MGP_DBA2J_T0032902	-	810	-	-	- (aa)	-	-
MGP_DBA2J_T0032901	-	708	-	-	- (aa)	-	-
MGP_DBA2J_T0032900	-	496	-	-	- (aa)	-	-
MGP_DBA2J_T0032897	-	3452	-	MGP_DBA2J_P0032897	406 (aa)	-	-
MGP_DBA2J_T0032896	-	3947	XM_006532135	MGP_DBA2J_P0032896	615 (aa)	XP_006532198	B1ARB9
MGP_DBA2J_T0032899	-	597	-	-	- (aa)	-	-
MGP_DBA2J_T0032898	-	879	-	MGP_DBA2J_P0032898	71 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0019145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0019145's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0019145	Ddx5	62	35.345	MGP_DBA2J_G0018696	Ddx52	66	31.204
MGP_DBA2J_G0019145	Ddx5	86	32.857	MGP_DBA2J_G0016389	Ddx59	66	33.094
MGP_DBA2J_G0019145	Ddx5	88	43.137	MGP_DBA2J_G0019130	Ddx42	51	40.365
MGP_DBA2J_G0019145	Ddx5	56	30.137	MGP_DBA2J_G0029913	Ddx55	60	30.137
MGP_DBA2J_G0019145	Ddx5	76	34.062	MGP_DBA2J_G0033520	Ddx49	97	35.311
MGP_DBA2J_G0019145	Ddx5	71	30.861	MGP_DBA2J_G0025378	Ddx31	56	31.313
MGP_DBA2J_G0019145	Ddx5	93	83.598	MGP_DBA2J_G0021909	Ddx17	87	71.553
MGP_DBA2J_G0019145	Ddx5	81	36.389	MGP_DBA2J_G0022133	Ddx23	50	37.915
MGP_DBA2J_G0019145	Ddx5	71	37.457	MGP_DBA2J_G0031233	Ddx47	81	37.168
MGP_DBA2J_G0019145	Ddx5	81	38.235	MGP_DBA2J_G0020434	Ddx41	64	39.163
MGP_DBA2J_G0019145	Ddx5	72	33.110	MGP_DBA2J_G0019310	Eif4a3	82	34.857
MGP_DBA2J_G0019145	Ddx5	74	31.699	MGP_DBA2J_G0016260	Ddx18	53	32.386
MGP_DBA2J_G0019145	Ddx5	89	45.040	MGP_DBA2J_G0034880	Ddx43	68	44.519
MGP_DBA2J_G0019145	Ddx5	80	38.922	MGP_DBA2J_G0020762	Ddx4	57	39.012
MGP_DBA2J_G0019145	Ddx5	73	31.148	MGP_DBA2J_G0034348	Ddx25	73	32.425
MGP_DBA2J_G0019145	Ddx5	78	31.498	MGP_DBA2J_G0018381	Eif4a1	89	32.804
MGP_DBA2J_G0019145	Ddx5	80	42.522	MGP_DBA2J_G0016762	D1Pas1	74	38.150
MGP_DBA2J_G0019145	Ddx5	78	32.110	MGP_DBA2J_G0022512	Eif4a2	92	33.714
MGP_DBA2J_G0019145	Ddx5	80	42.522	MGP_DBA2J_G0035380	Ddx3x	74	39.679