EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_DBA2J_G0019280 (Gene tree)
Gene ID
-
Gene Symbol
Tnrc6c
Alias
9930033H14Rik|mKIAA1582
Full Name
trinucleotide repeat containing 6C
Gene Type
protein_coding
Species
Mus_musculus_dba2j
Status
putative
Strand
Plus strand
Length
108766 bases
Position
chr11:115925299-116034064
Accession
2443265
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_DBA2J_P0033564Ago_hookPF10427.98.5e-2411
MGP_DBA2J_P0033566Ago_hookPF10427.98.5e-2411
MGP_DBA2J_P0033567Ago_hookPF10427.99.5e-2411
MGP_DBA2J_P0033567RRM_1PF00076.220.0004111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_DBA2J_T0033566-8834-MGP_DBA2J_P00335661900 (aa)--
MGP_DBA2J_T0033567-6609-MGP_DBA2J_P00335671732 (aa)--
MGP_DBA2J_T0033564-8711XM_006533109MGP_DBA2J_P00335641900 (aa)XP_006533172B1ATC3
MGP_DBA2J_T0033565-11578--- (aa)--
MGP_DBA2J_T0033568-742--- (aa)--
MGP_DBA2J_T0033569-1829--- (aa)--
Gene Model
Click here to download MGP_DBA2J_G0019280's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0019280's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_DBA2J_G0019280Tnrc6c9936.215MGP_DBA2J_G0021935Tnrc6b9637.419
MGP_DBA2J_G0019280Tnrc6c9940.570MGP_DBA2J_G0032782Tnrc6a9844.685

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us