EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_DBA2J_G0019302 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_dba2j
Status
putative
Strand
Minus strand
Length
425113 bases
Position
chr11:116757726-117182838
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_DBA2J_P0033660Fox-1_CPF12414.82.3e-4511
MGP_DBA2J_P0033663Fox-1_CPF12414.82.3e-4511
MGP_DBA2J_P0033664Fox-1_CPF12414.82.3e-4511
MGP_DBA2J_P0033661Fox-1_CPF12414.82.4e-4111
MGP_DBA2J_P0033662Fox-1_CPF12414.82.5e-4111
MGP_DBA2J_P0033659Fox-1_CPF12414.82.9e-4111
MGP_DBA2J_P0033665Fox-1_CPF12414.81.6e-2111
MGP_DBA2J_P0033666RRM_1PF00076.223.1e-1911
MGP_DBA2J_P0033660RRM_1PF00076.221.5e-1811
MGP_DBA2J_P0033663RRM_1PF00076.221.5e-1811
MGP_DBA2J_P0033664RRM_1PF00076.221.7e-1811
MGP_DBA2J_P0033659RRM_1PF00076.221.9e-1811
MGP_DBA2J_P0033662RRM_1PF00076.222.1e-1811
MGP_DBA2J_P0033665RRM_1PF00076.221.9e-1411
MGP_DBA2J_P0033661RRM_1PF00076.220.000311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_DBA2J_T0033659-3057XM_006533722MGP_DBA2J_P0033659360 (aa)XP_006533785Q8BIF2
MGP_DBA2J_T0033668-369--- (aa)--
MGP_DBA2J_T0033665-710-MGP_DBA2J_P0033665145 (aa)--
MGP_DBA2J_T0033664-2121-MGP_DBA2J_P0033664327 (aa)--
MGP_DBA2J_T0033667-301--- (aa)--
MGP_DBA2J_T0033666-900-MGP_DBA2J_P0033666169 (aa)--
MGP_DBA2J_T0033661-1553-MGP_DBA2J_P0033661329 (aa)--
MGP_DBA2J_T0033660-2809-MGP_DBA2J_P0033660313 (aa)--
MGP_DBA2J_T0033663-1515-MGP_DBA2J_P0033663313 (aa)--
MGP_DBA2J_T0033662-3101-MGP_DBA2J_P0033662374 (aa)--
Gene Model
Click here to download MGP_DBA2J_G0019302's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0019302's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_DBA2J_G0019302Rbfox36739.130MGP_DBA2J_G0028550Pabpc47736.709
MGP_DBA2J_G0019302Rbfox39961.932MGP_DBA2J_G0021852Rbfox29161.972
MGP_DBA2J_G0019302Rbfox310071.930MGP_DBA2J_G0022324Rbfox19165.123
MGP_DBA2J_G0019302Rbfox37231.429MGP_DBA2J_G0015878Boll5043.939
MGP_DBA2J_G0019302Rbfox35331.868MGP_DBA2J_G0032905Tial18131.111

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