EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0019724 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 5824 bases
Position: chr12:78000403-78006226
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0034995	RRM_1	PF00076.22	1.8e-30	1	2
MGP_DBA2J_P0034995	RRM_1	PF00076.22	1.8e-30	2	2
MGP_DBA2J_P0034999	RRM_1	PF00076.22	1.8e-30	1	2
MGP_DBA2J_P0034999	RRM_1	PF00076.22	1.8e-30	2	2
MGP_DBA2J_P0035005	RRM_1	PF00076.22	1.8e-30	1	2
MGP_DBA2J_P0035005	RRM_1	PF00076.22	1.8e-30	2	2
MGP_DBA2J_P0034997	RRM_1	PF00076.22	1.8e-30	1	2
MGP_DBA2J_P0034997	RRM_1	PF00076.22	1.8e-30	2	2
MGP_DBA2J_P0035000	RRM_1	PF00076.22	1.8e-30	1	2
MGP_DBA2J_P0035000	RRM_1	PF00076.22	1.8e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0035004	-	490	-	-	- (aa)	-	-
MGP_DBA2J_T0034996	-	2951	-	-	- (aa)	-	-
MGP_DBA2J_T0034997	-	1521	-	MGP_DBA2J_P0034997	274 (aa)	-	-
MGP_DBA2J_T0034995	-	1538	XM_006515629	MGP_DBA2J_P0034995	273 (aa)	XP_006515692	O35326
MGP_DBA2J_T0035005	-	1579	-	MGP_DBA2J_P0035005	273 (aa)	-	-
MGP_DBA2J_T0035003	-	547	-	MGP_DBA2J_P0035003	46 (aa)	-	-
MGP_DBA2J_T0035002	-	886	-	-	- (aa)	-	-
MGP_DBA2J_T0035001	-	538	-	-	- (aa)	-	-
MGP_DBA2J_T0035000	-	1509	-	MGP_DBA2J_P0035000	274 (aa)	-	-
MGP_DBA2J_T0035006	-	3494	-	-	- (aa)	-	-
MGP_DBA2J_T0034998	-	2731	-	-	- (aa)	-	-
MGP_DBA2J_T0034999	-	1502	-	MGP_DBA2J_P0034999	273 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0019724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0019724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0019724	Srsf5	96	51.020	MGP_DBA2J_G0018753	Srsf1	85	44.318
MGP_DBA2J_G0019724	Srsf5	89	63.415	MGP_DBA2J_G0026645	Srsf6	50	71.642
MGP_DBA2J_G0019724	Srsf5	89	48.780	MGP_DBA2J_G0029778	Srsf9	68	39.394