EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0019816 (Gene tree)
Gene ID: -
Gene Symbol: Slirp
Alias: 1810035L17Rik
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 6049 bases
Position: chr12:84498714-84504762
Accession: 1916394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0035335	RRM_1	PF00076.22	4.1e-14	1	1
MGP_DBA2J_P0035334	RRM_1	PF00076.22	8.8e-14	1	1
MGP_DBA2J_P0035336	RRM_1	PF00076.22	8.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0035335	-	385	-	MGP_DBA2J_P0035335	112 (aa)	-	-
MGP_DBA2J_T0035334	-	802	-	MGP_DBA2J_P0035334	99 (aa)	-	Q9D8T7
MGP_DBA2J_T0035336	-	335	-	MGP_DBA2J_P0035336	102 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0019816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0019816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0019816	Slirp	70	33.333	MGP_DBA2J_G0029593	Hnrnpd	71	33.333
MGP_DBA2J_G0019816	Slirp	70	33.824	MGP_DBA2J_G0018758	Msi2	60	33.824
MGP_DBA2J_G0019816	Slirp	78	33.846	MGP_DBA2J_G0017333	Dazap1	89	33.846
MGP_DBA2J_G0019816	Slirp	73	33.846	MGP_DBA2J_G0018102	Hnrnpab	51	33.846