EuRBPDB

Description

Ensembl ID: MGP_DBA2J_G0020503 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 91716 bases
Position: chr13:61324599-61416314
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0037179	ResIII	PF04851.15	1.5e-11	1	1
MGP_DBA2J_P0037181	ResIII	PF04851.15	1.9e-11	1	1
MGP_DBA2J_P0037178	ResIII	PF04851.15	2e-11	1	1
MGP_DBA2J_P0037176	ResIII	PF04851.15	1.1e-10	1	1
MGP_DBA2J_P0037182	ResIII	PF04851.15	1.3e-10	1	1
MGP_DBA2J_P0037175	ResIII	PF04851.15	8.3e-10	1	1
MGP_DBA2J_P0037179	DEAD	PF00270.29	3.5e-07	1	1
MGP_DBA2J_P0037182	DEAD	PF00270.29	4.1e-07	1	1
MGP_DBA2J_P0037181	DEAD	PF00270.29	5.2e-07	1	1
MGP_DBA2J_P0037178	DEAD	PF00270.29	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0037179	-	1888	-	MGP_DBA2J_P0037179	582 (aa)	-	-
MGP_DBA2J_T0037178	-	2692	-	MGP_DBA2J_P0037178	699 (aa)	-	-
MGP_DBA2J_T0037182	-	1726	-	MGP_DBA2J_P0037182	574 (aa)	-	-
MGP_DBA2J_T0037183	-	759	-	MGP_DBA2J_P0037183	152 (aa)	-	-
MGP_DBA2J_T0037184	-	983	-	-	- (aa)	-	-
MGP_DBA2J_T0037185	-	2573	-	MGP_DBA2J_P0037185	592 (aa)	-	-
MGP_DBA2J_T0037181	-	2529	-	MGP_DBA2J_P0037181	684 (aa)	-	-
MGP_DBA2J_T0037175	-	1592	-	MGP_DBA2J_P0037175	467 (aa)	-	Q9JIM3
MGP_DBA2J_T0037177	-	1820	-	-	- (aa)	-	-
MGP_DBA2J_T0037176	-	3436	-	MGP_DBA2J_P0037176	842 (aa)	-	-
MGP_DBA2J_T0037180	-	1961	-	MGP_DBA2J_P0037180	191 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0020503	Ercc6l2	82	30.353	MGP_DBA2J_G0035485	Smarca1	71	30.490
MGP_DBA2J_G0020503	Ercc6l2	81	30.021	MGP_DBA2J_G0027463	Chd1l	50	32.657