EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_DBA2J_G0021160 (Gene tree)
Gene ID
-
Gene Symbol
Pabpn1
Alias
PAB2|Pab2|Pabp2|Pabp3|mPABII|poly(A) binding protein II
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Mus_musculus_dba2j
Status
putative
Strand
Plus strand
Length
6434 bases
Position
chr14:47651538-47657971
Accession
1859158
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_DBA2J_P0039232RRM_1PF00076.223.8e-1511
MGP_DBA2J_P0039237RRM_1PF00076.224.8e-1511
MGP_DBA2J_P0039235RRM_1PF00076.221.3e-1411
MGP_DBA2J_P0039233RRM_1PF00076.221.4e-1411
MGP_DBA2J_P0039234RRM_1PF00076.221.5e-1411
MGP_DBA2J_P0039238RRM_1PF00076.228.6e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_DBA2J_T0039232-680XM_006519272MGP_DBA2J_P0039232164 (aa)XP_006519335Q8CCS6
MGP_DBA2J_T0039233-1032-MGP_DBA2J_P0039233302 (aa)--
MGP_DBA2J_T0039234-1777-MGP_DBA2J_P0039234319 (aa)--
MGP_DBA2J_T0039235-2529-MGP_DBA2J_P0039235292 (aa)--
MGP_DBA2J_T0039236-826-MGP_DBA2J_P003923673 (aa)--
MGP_DBA2J_T0039237-701-MGP_DBA2J_P0039237178 (aa)--
MGP_DBA2J_T0039238-939-MGP_DBA2J_P003923842 (aa)--
Gene Model
Click here to download MGP_DBA2J_G0021160's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0021160's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_DBA2J_G0021160Pabpn1100100.000MGP_DBA2J_G0021159Gm2052157100.000
MGP_DBA2J_G0021160Pabpn19361.538MGP_DBA2J_G0034049Pabpn1l5154.422

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