EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_DBA2J_G0021921 (Gene tree)
Gene ID
-
Gene Symbol
Apobec3
Alias
APOBEC3|Apobec|Arp3|BC003314|CEM15|Cem15|Gm20117|Rfv-3|Rfv3
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 3
Gene Type
protein_coding
Species
Mus_musculus_dba2j
Status
putative
Strand
Plus strand
Length
24699 bases
Position
chr15:76915979-76940677
Accession
1933111
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_DBA2J_P0041523APOBEC_NPF08210.112.6e-7912
MGP_DBA2J_P0041523APOBEC_NPF08210.112.6e-7922
MGP_DBA2J_P0041520APOBEC_NPF08210.113.3e-7912
MGP_DBA2J_P0041520APOBEC_NPF08210.113.3e-7922
MGP_DBA2J_P0041524APOBEC_NPF08210.113.3e-7912
MGP_DBA2J_P0041524APOBEC_NPF08210.113.3e-7922
MGP_DBA2J_P0041526APOBEC_NPF08210.113.6e-7912
MGP_DBA2J_P0041526APOBEC_NPF08210.113.6e-7922
MGP_DBA2J_P0041518APOBEC_NPF08210.112.6e-2611
MGP_DBA2J_P0041517APOBEC_NPF08210.117.6e-2611
MGP_DBA2J_P0041527APOBEC_NPF08210.118.7e-2411
MGP_DBA2J_P0041523APOBEC_CPF05240.147.7e-5412
MGP_DBA2J_P0041523APOBEC_CPF05240.147.7e-5422
MGP_DBA2J_P0041520APOBEC_CPF05240.141.2e-5312
MGP_DBA2J_P0041520APOBEC_CPF05240.141.2e-5322
MGP_DBA2J_P0041524APOBEC_CPF05240.141.3e-5312
MGP_DBA2J_P0041524APOBEC_CPF05240.141.3e-5322
MGP_DBA2J_P0041526APOBEC_CPF05240.141.5e-5312
MGP_DBA2J_P0041526APOBEC_CPF05240.141.5e-5322
MGP_DBA2J_P0041517APOBEC_CPF05240.144.4e-2811
MGP_DBA2J_P0041518APOBEC_CPF05240.145.2e-2811
MGP_DBA2J_P0041527APOBEC_CPF05240.141.7e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_DBA2J_T0041530-720--- (aa)--
MGP_DBA2J_T0041518-817-MGP_DBA2J_P0041518151 (aa)--
MGP_DBA2J_T0041519-607--- (aa)--
MGP_DBA2J_T0041517-750XM_006521551MGP_DBA2J_P0041517166 (aa)XP_006521614Q99J72
MGP_DBA2J_T0041527-648-MGP_DBA2J_P004152785 (aa)--
MGP_DBA2J_T0041526-1323-MGP_DBA2J_P0041526440 (aa)--
MGP_DBA2J_T0041525-2246-MGP_DBA2J_P0041525392 (aa)--
MGP_DBA2J_T0041524-2780-MGP_DBA2J_P0041524430 (aa)--
MGP_DBA2J_T0041523-1980-MGP_DBA2J_P0041523407 (aa)--
MGP_DBA2J_T0041522-1217-MGP_DBA2J_P004152246 (aa)--
MGP_DBA2J_T0041521-699-MGP_DBA2J_P004152179 (aa)--
MGP_DBA2J_T0041520-2460-MGP_DBA2J_P0041520429 (aa)--
MGP_DBA2J_T0041529-2082--- (aa)--
MGP_DBA2J_T0041528-731--- (aa)--
Gene Model
Click here to download MGP_DBA2J_G0021921's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0021921's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_DBA2J_G0021921Apobec39642.169MGP_DBA2J_G0031045Aicda9139.344
MGP_DBA2J_G0021921Apobec38438.028MGP_DBA2J_G0031046Apobec17434.737
MGP_DBA2J_G0021921Apobec39833.721MGP_DBA2J_G0023703Apobec27833.333

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us