EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0022248 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp2
Alias: AW412548|Cbp|Hnrnpx|Hnrpx|alphaCP-2
Full Name: poly(rC) binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 28869 bases
Position: chr15:99819373-99848241
Accession: 108202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0042539	KH_1	PF00013.29	1.6e-49	1	3
MGP_DBA2J_P0042539	KH_1	PF00013.29	1.6e-49	2	3
MGP_DBA2J_P0042539	KH_1	PF00013.29	1.6e-49	3	3
MGP_DBA2J_P0042541	KH_1	PF00013.29	2e-49	1	3
MGP_DBA2J_P0042541	KH_1	PF00013.29	2e-49	2	3
MGP_DBA2J_P0042541	KH_1	PF00013.29	2e-49	3	3
MGP_DBA2J_P0042540	KH_1	PF00013.29	2.4e-49	1	3
MGP_DBA2J_P0042540	KH_1	PF00013.29	2.4e-49	2	3
MGP_DBA2J_P0042540	KH_1	PF00013.29	2.4e-49	3	3
MGP_DBA2J_P0042539	KH_2	PF07650.17	2e-14	1	1
MGP_DBA2J_P0042541	KH_2	PF07650.17	2.5e-14	1	1
MGP_DBA2J_P0042540	KH_2	PF07650.17	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0042540	-	2803	-	MGP_DBA2J_P0042540	362 (aa)	-	-
MGP_DBA2J_T0042539	-	2710	XM_006520582	MGP_DBA2J_P0042539	331 (aa)	XP_006520645	Q61990
MGP_DBA2J_T0042541	-	2764	-	MGP_DBA2J_P0042541	349 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0022248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0022248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0022248	Pcbp2	68	33.333	MGP_DBA2J_G0023776	Khsrp	51	33.333
MGP_DBA2J_G0022248	Pcbp2	69	39.726	MGP_DBA2J_G0019545	Nova1	53	39.726
MGP_DBA2J_G0022248	Pcbp2	97	59.877	MGP_DBA2J_G0035044	Pcbp4	98	66.321
MGP_DBA2J_G0022248	Pcbp2	54	30.303	MGP_DBA2J_G0032276	-	81	30.303
MGP_DBA2J_G0022248	Pcbp2	84	44.444	MGP_DBA2J_G0020465	Hnrnpk	66	44.000
MGP_DBA2J_G0022248	Pcbp2	100	81.744	MGP_DBA2J_G0030797	Pcbp1	100	81.744
MGP_DBA2J_G0022248	Pcbp2	68	41.096	MGP_DBA2J_G0031569	Nova2	50	41.096
MGP_DBA2J_G0022248	Pcbp2	95	35.556	MGP_DBA2J_G0022501	Igf2bp2	62	35.556
MGP_DBA2J_G0022248	Pcbp2	99	78.338	MGP_DBA2J_G0017228	Pcbp3	99	82.143