EuRBPDB

Description

Ensembl ID: MGP_DBA2J_G0022268 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa1
Alias: D15Ertd119e|EG545091|Fli-2|HDP-1|Hdp|Hnrpa1|Hnrpa1 {ECO:0000313|EMBL:AAH89340.1,GN ECO:0000313|MGI:MGI:104820}|Tis|hnRNP A1|hnrnp-A|hnrnp-A1
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 5651 bases
Position: chr15:100595440-100601090
Accession: 104820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0042609	RRM_1	PF00076.22	2.2e-25	1	2
MGP_DBA2J_P0042609	RRM_1	PF00076.22	2.2e-25	2	2
MGP_DBA2J_P0042609	HnRNPA1	PF11627.8	3.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0042609	-	1333	-	MGP_DBA2J_P0042609	351 (aa)	-	P49312

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0022268	Hnrnpa1	52	30.151	MGP_DBA2J_G0028942	Tardbp	66	32.593
MGP_DBA2J_G0022268	Hnrnpa1	87	52.584	MGP_DBA2J_G0030552	Hnrnpa2b1	82	74.286
MGP_DBA2J_G0022268	Hnrnpa1	62	39.080	MGP_DBA2J_G0029782	Msi1	59	39.080