EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0045271	PABP	PF00658.18	1.4e-26	1	1
MGP_DBA2J_P0045271	RRM_5	PF13893.6	4.3e-07	1	1
MGP_DBA2J_P0045271	RRM_1	PF00076.22	1.9e-89	1	4
MGP_DBA2J_P0045271	RRM_1	PF00076.22	1.9e-89	2	4
MGP_DBA2J_P0045271	RRM_1	PF00076.22	1.9e-89	3	4
MGP_DBA2J_P0045271	RRM_1	PF00076.22	1.9e-89	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0045271	-	3208	-	MGP_DBA2J_P0045271	643 (aa)	-	Q9D4E6

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0022975	Pabpc6	59	34.091	MGP_DBA2J_G0035211	Rbms3	77	33.708
MGP_DBA2J_G0022975	Pabpc6	62	36.842	MGP_DBA2J_G0024042	Celf4	62	36.842
MGP_DBA2J_G0022975	Pabpc6	99	80.341	MGP_DBA2J_G0021631	Pabpc1	99	80.186
MGP_DBA2J_G0022975	Pabpc6	51	34.211	MGP_DBA2J_G0025176	Celf2	57	34.211
MGP_DBA2J_G0022975	Pabpc6	64	39.062	MGP_DBA2J_G0034715	Celf6	77	39.062
MGP_DBA2J_G0022975	Pabpc6	72	36.585	MGP_DBA2J_G0027374	Celf3	80	37.500
MGP_DBA2J_G0022975	Pabpc6	97	56.625	MGP_DBA2J_G0026666	Pabpc1l	99	56.467
MGP_DBA2J_G0022975	Pabpc6	57	34.667	MGP_DBA2J_G0029813	Rbm19	70	34.667
MGP_DBA2J_G0022975	Pabpc6	53	35.526	MGP_DBA2J_G0025972	Celf1	52	35.526
MGP_DBA2J_G0022975	Pabpc6	58	36.905	MGP_DBA2J_G0030794	Tia1	96	36.905
MGP_DBA2J_G0022975	Pabpc6	99	68.125	MGP_DBA2J_G0028550	Pabpc4	100	87.379
MGP_DBA2J_G0022975	Pabpc6	60	37.349	MGP_DBA2J_G0028258	Elavl2	90	37.349
MGP_DBA2J_G0022975	Pabpc6	61	36.145	MGP_DBA2J_G0034286	Elavl3	92	36.145
MGP_DBA2J_G0022975	Pabpc6	58	38.798	MGP_DBA2J_G0027426	Sf3b4	68	38.798
MGP_DBA2J_G0022975	Pabpc6	59	58.470	MGP_DBA2J_G0035849	Pabpc5	95	58.445
MGP_DBA2J_G0022975	Pabpc6	91	71.154	MGP_DBA2J_G0026870	-	99	63.536
MGP_DBA2J_G0022975	Pabpc6	58	64.497	MGP_DBA2J_G0027016	Pabpc4l	98	64.497
MGP_DBA2J_G0022975	Pabpc6	99	70.186	MGP_DBA2J_G0024202	Pabpc2	99	69.876
MGP_DBA2J_G0022975	Pabpc6	60	32.468	MGP_DBA2J_G0028389	Elavl4	88	32.468
MGP_DBA2J_G0022975	Pabpc6	56	34.014	MGP_DBA2J_G0032905	Tial1	94	31.783