EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0023322 (Gene tree)
Gene ID: -
Gene Symbol: U2af1
Alias: 2010107D16Rik|35kDa
Full Name: U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 11582 bases
Position: chr17:29798086-29809667
Accession: 98884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0046494	zf-CCCH	PF00642.24	1.5e-13	1	2
MGP_DBA2J_P0046494	zf-CCCH	PF00642.24	1.5e-13	2	2
MGP_DBA2J_P0046493	zf-CCCH	PF00642.24	1.5e-13	1	2
MGP_DBA2J_P0046493	zf-CCCH	PF00642.24	1.5e-13	2	2
MGP_DBA2J_P0046493	RRM_1	PF00076.22	2.9e-06	1	1
MGP_DBA2J_P0046494	RRM_1	PF00076.22	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0046494	-	907	-	MGP_DBA2J_P0046494	239 (aa)	-	-
MGP_DBA2J_T0046493	-	907	XM_006523472	MGP_DBA2J_P0046493	239 (aa)	XP_006523535	Q9D883

Gene Model

Click here to download MGP_DBA2J_G0023322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0023322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0023322	U2af1	83	86.935	MGP_DBA2J_G0031850	-	100	90.385