EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_DBA2J_G0023438 (Gene tree)
Gene ID
-
Gene Symbol
Vars
Alias
Bat-6|Bat6|D17H6S56E|G7a|Vars2|Vars2GN
Full Name
valyl-tRNA synthetase
Gene Type
protein_coding
Species
Mus_musculus_dba2j
Status
putative
Strand
Plus strand
Length
15293 bases
Position
chr17:33293433-33308725
Accession
90675
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_DBA2J_P0047000tRNA-synt_1gPF09334.118.8e-1111
MGP_DBA2J_P0047001tRNA-synt_1gPF09334.119.3e-1111
MGP_DBA2J_P0047000Anticodon_1PF08264.133.8e-3211
MGP_DBA2J_P0047001Anticodon_1PF08264.134e-3211
MGP_DBA2J_P0047000tRNA-synt_1PF00133.221.5e-20111
MGP_DBA2J_P0047001tRNA-synt_1PF00133.221.6e-20111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_DBA2J_T0047002-819-MGP_DBA2J_P0047002230 (aa)--
MGP_DBA2J_T0047003-423-MGP_DBA2J_P0047003125 (aa)--
MGP_DBA2J_T0047000-4137XM_017317395MGP_DBA2J_P00470001263 (aa)XP_017172884Q9Z1Q9
MGP_DBA2J_T0047001-4048-MGP_DBA2J_P00470011278 (aa)--
MGP_DBA2J_T0047006-347--- (aa)--
MGP_DBA2J_T0047007-746--- (aa)--
MGP_DBA2J_T0047004-3731--- (aa)--
MGP_DBA2J_T0047005-475--- (aa)--
MGP_DBA2J_T0047011-744--- (aa)--
MGP_DBA2J_T0047008-557--- (aa)--
MGP_DBA2J_T0047009-806--- (aa)--
MGP_DBA2J_T0047012-826--- (aa)--
MGP_DBA2J_T0047010-388-MGP_DBA2J_P0047010129 (aa)--
Gene Model
Click here to download MGP_DBA2J_G0023438's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0023438's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_DBA2J_G0023438Vars8250.384MGP_DBA2J_G0023477Vars29252.661

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