EuRBPDB

Description

Ensembl ID: MGP_DBA2J_G0024113 (Gene tree)
Gene ID: -
Gene Symbol: Ankhd1
Alias: 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085
Full Name: ankyrin repeat and KH domain containing 1
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 106439 bases
Position: chr18:33353160-33459598
Accession: 1921733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0049057	KH_1	PF00013.29	1.8e-14	1	1
MGP_DBA2J_P0049046	KH_1	PF00013.29	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0049048	-	8244	-	MGP_DBA2J_P0049048	2488 (aa)	-	-
MGP_DBA2J_T0049049	-	485	-	-	- (aa)	-	-
MGP_DBA2J_T0049045	-	641	-	MGP_DBA2J_P0049045	213 (aa)	-	E9PUR0
MGP_DBA2J_T0049046	-	8234	-	MGP_DBA2J_P0049046	2551 (aa)	-	-
MGP_DBA2J_T0049047	-	8211	-	MGP_DBA2J_P0049047	2488 (aa)	-	-
MGP_DBA2J_T0049053	-	610	-	-	- (aa)	-	-
MGP_DBA2J_T0049052	-	658	-	MGP_DBA2J_P0049052	218 (aa)	-	-
MGP_DBA2J_T0049051	-	1033	-	-	- (aa)	-	-
MGP_DBA2J_T0049050	-	1005	-	MGP_DBA2J_P0049050	334 (aa)	-	-
MGP_DBA2J_T0049057	-	3519	-	MGP_DBA2J_P0049057	1020 (aa)	-	-
MGP_DBA2J_T0049056	-	500	-	-	- (aa)	-	-
MGP_DBA2J_T0049055	-	523	-	MGP_DBA2J_P0049055	90 (aa)	-	-
MGP_DBA2J_T0049054	-	603	-	MGP_DBA2J_P0049054	110 (aa)	-	-
MGP_DBA2J_T0049059	-	860	-	MGP_DBA2J_P0049059	168 (aa)	-	-
MGP_DBA2J_T0049058	-	2235	-	MGP_DBA2J_P0049058	636 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0024113	Ankhd1	67	84.211	MGP_DBA2J_G0029532	Ankrd17	69	86.878