EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0024436 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 105083 bases
Position: chr18:79503123-79608205
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	1	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	2	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	3	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	4	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	5	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	6	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	7	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	8	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	9	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	10	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	11	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	12	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	13	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	14	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	15	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	16	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	17	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	18	19
MGP_DBA2J_P0049934	zf-C2H2	PF00096.26	1.1e-110	19	19
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	1	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	2	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	3	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	4	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	5	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	6	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	7	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	8	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	9	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	10	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	11	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	12	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	13	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	14	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	15	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	16	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	17	18
MGP_DBA2J_P0049931	zf-C2H2	PF00096.26	5.8e-108	18	18
MGP_DBA2J_P0049937	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_DBA2J_P0049931	zf-met	PF12874.7	5.9e-06	1	4
MGP_DBA2J_P0049931	zf-met	PF12874.7	5.9e-06	2	4
MGP_DBA2J_P0049931	zf-met	PF12874.7	5.9e-06	3	4
MGP_DBA2J_P0049931	zf-met	PF12874.7	5.9e-06	4	4
MGP_DBA2J_P0049934	zf-met	PF12874.7	3.4e-05	1	4
MGP_DBA2J_P0049934	zf-met	PF12874.7	3.4e-05	2	4
MGP_DBA2J_P0049934	zf-met	PF12874.7	3.4e-05	3	4
MGP_DBA2J_P0049934	zf-met	PF12874.7	3.4e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0049934	-	6059	-	MGP_DBA2J_P0049934	1847 (aa)	-	-
MGP_DBA2J_T0049935	-	6170	-	MGP_DBA2J_P0049935	485 (aa)	-	-
MGP_DBA2J_T0049936	-	665	-	-	- (aa)	-	-
MGP_DBA2J_T0049937	-	410	-	MGP_DBA2J_P0049937	65 (aa)	-	-
MGP_DBA2J_T0049931	-	9535	XM_006526490	MGP_DBA2J_P0049931	1799 (aa)	XP_006526553	B2RR24
MGP_DBA2J_T0049932	-	9561	-	MGP_DBA2J_P0049932	1840 (aa)	-	-
MGP_DBA2J_T0049933	-	3227	-	MGP_DBA2J_P0049933	42 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0024436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0024436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0024436	Zfp236	81	53.333	MGP_DBA2J_G0026762	Sall4	73	53.333
MGP_DBA2J_G0024436	Zfp236	78	41.667	MGP_DBA2J_G0026763	Zfp64	70	42.500
MGP_DBA2J_G0024436	Zfp236	69	40.559	MGP_DBA2J_G0021844	Zfp251	79	40.559
MGP_DBA2J_G0024436	Zfp236	77	43.860	MGP_DBA2J_G0030651	Prdm5	87	46.739
MGP_DBA2J_G0024436	Zfp236	73	37.143	MGP_DBA2J_G0023091	Zscan10	79	37.143
MGP_DBA2J_G0024436	Zfp236	79	47.059	MGP_DBA2J_G0031811	Zfp420	99	47.059
MGP_DBA2J_G0024436	Zfp236	68	44.643	MGP_DBA2J_G0031397	-	66	44.643
MGP_DBA2J_G0024436	Zfp236	69	44.643	MGP_DBA2J_G0031396	Zfp865	78	44.643
MGP_DBA2J_G0024436	Zfp236	65	45.536	MGP_DBA2J_G0031644	Zfp108	59	43.119
MGP_DBA2J_G0024436	Zfp236	62	44.068	MGP_DBA2J_G0031646	Zfp61	57	42.857
MGP_DBA2J_G0024436	Zfp236	63	40.141	MGP_DBA2J_G0031641	Zfp114	68	40.141
MGP_DBA2J_G0024436	Zfp236	70	43.411	MGP_DBA2J_G0031640	Zfp235	66	43.411
MGP_DBA2J_G0024436	Zfp236	68	46.667	MGP_DBA2J_G0031642	Zfp111	77	46.667
MGP_DBA2J_G0024436	Zfp236	77	40.157	MGP_DBA2J_G0018235	Zfp867	94	45.902
MGP_DBA2J_G0024436	Zfp236	58	47.727	MGP_DBA2J_G0020529	Rslcan18	70	47.727
MGP_DBA2J_G0024436	Zfp236	80	46.575	MGP_DBA2J_G0020530	Zfp759	97	37.975
MGP_DBA2J_G0024436	Zfp236	57	36.242	MGP_DBA2J_G0034040	Snai3	67	47.297
MGP_DBA2J_G0024436	Zfp236	78	36.471	MGP_DBA2J_G0018185	Zfp672	96	41.096
MGP_DBA2J_G0024436	Zfp236	70	41.121	MGP_DBA2J_G0033586	Zfp882	87	45.652
MGP_DBA2J_G0024436	Zfp236	79	37.000	MGP_DBA2J_G0031748	Zfp974	86	45.652
MGP_DBA2J_G0024436	Zfp236	58	48.780	MGP_DBA2J_G0032855	Zfp768	53	45.536
MGP_DBA2J_G0024436	Zfp236	73	36.559	MGP_DBA2J_G0032859	-	89	34.510
MGP_DBA2J_G0024436	Zfp236	58	42.177	MGP_DBA2J_G0032858	E430018J23Rik	58	42.177
MGP_DBA2J_G0024436	Zfp236	68	39.806	MGP_DBA2J_G0031639	Zfp112	52	42.742
MGP_DBA2J_G0024436	Zfp236	70	48.864	MGP_DBA2J_G0026948	Mynn	62	48.864
MGP_DBA2J_G0024436	Zfp236	59	41.748	MGP_DBA2J_G0018821	Zfp652	60	41.748
MGP_DBA2J_G0024436	Zfp236	63	42.697	MGP_DBA2J_G0018088	Zfp454	76	42.982
MGP_DBA2J_G0024436	Zfp236	86	31.818	MGP_DBA2J_G0017011	Zbtb24	54	45.794
MGP_DBA2J_G0024436	Zfp236	69	42.727	MGP_DBA2J_G0028860	Zbtb17	61	42.727
MGP_DBA2J_G0024436	Zfp236	75	45.283	MGP_DBA2J_G0023064	Zfp51	75	45.283
MGP_DBA2J_G0024436	Zfp236	69	42.222	MGP_DBA2J_G0023062	Zfp677	78	45.455
MGP_DBA2J_G0024436	Zfp236	71	35.669	MGP_DBA2J_G0031099	Zfp384	68	38.655
MGP_DBA2J_G0024436	Zfp236	59	41.096	MGP_DBA2J_G0031388	Zfp628	61	42.500
MGP_DBA2J_G0024436	Zfp236	62	43.023	MGP_DBA2J_G0029321	Zbtb49	62	47.887
MGP_DBA2J_G0024436	Zfp236	81	44.304	MGP_DBA2J_G0030518	Repin1	99	41.667
MGP_DBA2J_G0024436	Zfp236	63	42.500	MGP_DBA2J_G0031677	Zfp574	95	41.304
MGP_DBA2J_G0024436	Zfp236	74	42.857	MGP_DBA2J_G0031941	Zfp715	69	41.935
MGP_DBA2J_G0024436	Zfp236	53	30.734	MGP_DBA2J_G0031399	Zfp784	79	40.244
MGP_DBA2J_G0024436	Zfp236	71	41.228	MGP_DBA2J_G0033729	Zfp423	94	41.228
MGP_DBA2J_G0024436	Zfp236	66	38.824	MGP_DBA2J_G0016400	Zbtb41	61	38.824
MGP_DBA2J_G0024436	Zfp236	68	44.545	MGP_DBA2J_G0026725	Zfp334	68	44.545
MGP_DBA2J_G0024436	Zfp236	78	40.690	MGP_DBA2J_G0033798	Zfp319	87	40.690
MGP_DBA2J_G0024436	Zfp236	61	41.228	MGP_DBA2J_G0026296	Zfp661	69	42.857
MGP_DBA2J_G0024436	Zfp236	66	45.455	MGP_DBA2J_G0030998	Zfp637	85	51.807
MGP_DBA2J_G0024436	Zfp236	62	44.318	MGP_DBA2J_G0034293	Zfp872	94	40.800
MGP_DBA2J_G0024436	Zfp236	80	38.732	MGP_DBA2J_G0023084	Zfp945	77	45.349
MGP_DBA2J_G0024436	Zfp236	69	42.647	MGP_DBA2J_G0031647	Zfp94	76	42.647
MGP_DBA2J_G0024436	Zfp236	54	46.739	MGP_DBA2J_G0029656	Gfi1	100	46.739
MGP_DBA2J_G0024436	Zfp236	81	39.437	MGP_DBA2J_G0020547	Zfp748	94	41.905
MGP_DBA2J_G0024436	Zfp236	60	45.652	MGP_DBA2J_G0033957	Zfp1	67	45.652
MGP_DBA2J_G0024436	Zfp236	76	38.554	MGP_DBA2J_G0032882	Zfp646	90	34.940