EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0024504 (Gene tree)
Gene ID: -
Gene Symbol: Gm21992
Alias: Rbm14|Rbm14-rbm4|Rbm4 fusionGN
Full Name: predicted gene 21992
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 73669 bases
Position: chr19:1522876-1596544
Accession: 5439461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0050196	zf-CCHC	PF00098.23	2.4e-07	1	1
MGP_DBA2J_P0050195	zf-CCHC	PF00098.23	3.7e-07	1	1
MGP_DBA2J_P0050195	RRM_5	PF13893.6	6.1e-13	1	3
MGP_DBA2J_P0050195	RRM_5	PF13893.6	6.1e-13	2	3
MGP_DBA2J_P0050195	RRM_5	PF13893.6	6.1e-13	3	3
MGP_DBA2J_P0050195	RRM_1	PF00076.22	4.6e-54	1	4
MGP_DBA2J_P0050195	RRM_1	PF00076.22	4.6e-54	2	4
MGP_DBA2J_P0050195	RRM_1	PF00076.22	4.6e-54	3	4
MGP_DBA2J_P0050195	RRM_1	PF00076.22	4.6e-54	4	4
MGP_DBA2J_P0050196	RRM_1	PF00076.22	9.8e-18	1	2
MGP_DBA2J_P0050196	RRM_1	PF00076.22	9.8e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0050187	-	2590	-	MGP_DBA2J_P0050187	118 (aa)	-	B0LM42
MGP_DBA2J_T0050195	-	1929	-	MGP_DBA2J_P0050195	477 (aa)	-	-
MGP_DBA2J_T0050196	-	1435	-	MGP_DBA2J_P0050196	336 (aa)	-	-
MGP_DBA2J_T0050197	-	456	-	MGP_DBA2J_P0050197	19 (aa)	-	-
MGP_DBA2J_T0050202	-	2298	-	-	- (aa)	-	-
MGP_DBA2J_T0050203	-	531	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0024504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0024504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0024504	Gm21992	100	100.000	MGP_DBA2J_G0024506	Rbm4	100	100.000
MGP_DBA2J_G0024504	Gm21992	100	96.610	MGP_DBA2J_G0024507	Rbm14	97	99.130
MGP_DBA2J_G0024504	Gm21992	76	72.887	MGP_DBA2J_G0024505	Rbm4b	100	73.852
MGP_DBA2J_G0024504	Gm21992	90	31.061	MGP_DBA2J_G0017333	Dazap1	78	30.147