EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0024506 (Gene tree)
Gene ID: -
Gene Symbol: Rbm4
Alias: 4921506I22Rik|Lark1|Mlark|Rbm4a|lark
Full Name: RNA binding motif protein 4
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 9604 bases
Position: chr19:1565615-1575218
Accession: 1100865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0050194	zf-CCHC	PF00098.23	2.7e-07	1	1
MGP_DBA2J_P0050194	RRM_5	PF13893.6	4.4e-08	1	2
MGP_DBA2J_P0050194	RRM_5	PF13893.6	4.4e-08	2	2
MGP_DBA2J_P0050198	RRM_5	PF13893.6	2e-06	1	1
MGP_DBA2J_P0050199	RRM_5	PF13893.6	2e-06	1	1
MGP_DBA2J_P0050198	RRM_1	PF00076.22	9.9e-35	1	2
MGP_DBA2J_P0050198	RRM_1	PF00076.22	9.9e-35	2	2
MGP_DBA2J_P0050199	RRM_1	PF00076.22	9.9e-35	1	2
MGP_DBA2J_P0050199	RRM_1	PF00076.22	9.9e-35	2	2
MGP_DBA2J_P0050194	RRM_1	PF00076.22	1.3e-34	1	2
MGP_DBA2J_P0050194	RRM_1	PF00076.22	1.3e-34	2	2
MGP_DBA2J_P0050200	RRM_1	PF00076.22	4.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0050198	-	1018	-	MGP_DBA2J_P0050198	143 (aa)	-	-
MGP_DBA2J_T0050199	-	801	-	MGP_DBA2J_P0050199	143 (aa)	-	-
MGP_DBA2J_T0050200	-	602	-	MGP_DBA2J_P0050200	182 (aa)	-	-
MGP_DBA2J_T0050194	-	2610	-	MGP_DBA2J_P0050194	361 (aa)	-	Q8C7Q4
MGP_DBA2J_T0050201	-	2825	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0024506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0024506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0024506	Rbm4	100	100.000	MGP_DBA2J_G0024504	Gm21992	100	100.000
MGP_DBA2J_G0024506	Rbm4	100	72.887	MGP_DBA2J_G0024505	Rbm4b	100	73.592
MGP_DBA2J_G0024506	Rbm4	97	44.604	MGP_DBA2J_G0024507	Rbm14	94	41.964
MGP_DBA2J_G0024506	Rbm4	52	30.120	MGP_DBA2J_G0028389	Elavl4	61	30.120
MGP_DBA2J_G0024506	Rbm4	50	32.500	MGP_DBA2J_G0035549	Rbmx	83	31.765
MGP_DBA2J_G0024506	Rbm4	94	30.345	MGP_DBA2J_G0032905	Tial1	84	30.088
MGP_DBA2J_G0024506	Rbm4	98	30.000	MGP_DBA2J_G0030794	Tia1	85	30.000
MGP_DBA2J_G0024506	Rbm4	77	33.036	MGP_DBA2J_G0021227	Pspc1	93	36.066
MGP_DBA2J_G0024506	Rbm4	52	34.667	MGP_DBA2J_G0026645	Srsf6	56	34.667