EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_DBA2J_G0024642 (Gene tree)
Gene ID
-
Gene Symbol
Nxf1
Alias
0610006I08Rik|Mex67|Mvb1|TAP|Tap|Tip associated protein
Full Name
nuclear RNA export factor 1
Gene Type
protein_coding
Species
Mus_musculus_dba2j
Status
putative
Strand
Plus strand
Length
16314 bases
Position
chr19:5539690-5556003
Accession
1858330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_DBA2J_P0050686Tap-RNA_bindPF09162.101.6e-3811
MGP_DBA2J_P0050687Tap-RNA_bindPF09162.101.8e-3811
MGP_DBA2J_P0050689Tap-RNA_bindPF09162.101.1e-2211
MGP_DBA2J_P0050695TAP_CPF03943.137.1e-2611
MGP_DBA2J_P0050686TAP_CPF03943.131.8e-2411
MGP_DBA2J_P0050686NTF2PF02136.209e-2711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_DBA2J_T0050697-474--- (aa)--
MGP_DBA2J_T0050696-431--- (aa)--
MGP_DBA2J_T0050695-505-MGP_DBA2J_P005069588 (aa)--
MGP_DBA2J_T0050694-519--- (aa)--
MGP_DBA2J_T0050693-927--- (aa)--
MGP_DBA2J_T0050686-2326-MGP_DBA2J_P0050686618 (aa)-Q99JX7
MGP_DBA2J_T0050691-236-MGP_DBA2J_P005069178 (aa)--
MGP_DBA2J_T0050690-567-MGP_DBA2J_P005069075 (aa)--
MGP_DBA2J_T0050688-590--- (aa)--
MGP_DBA2J_T0050689-1017-MGP_DBA2J_P0050689282 (aa)--
MGP_DBA2J_T0050687-5595-MGP_DBA2J_P0050687418 (aa)--
MGP_DBA2J_T0050692-3083-MGP_DBA2J_P0050692251 (aa)--
Gene Model
Click here to download MGP_DBA2J_G0024642's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0024642's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_DBA2J_G0024642Nxf19856.504MGP_DBA2J_G0035887Nxf28254.887
MGP_DBA2J_G0024642Nxf19950.602MGP_DBA2J_G0035893Nxf79647.579
MGP_DBA2J_G0024642Nxf19948.000MGP_DBA2J_G0035903Nxf39138.475

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us