EuRBPDB

Description

Ensembl ID: MGP_DBA2J_G0024847 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 179375 bases
Position: chr19:23605374-23784748
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0051136	ResIII	PF04851.15	3.9e-08	1	1
MGP_DBA2J_P0051137	ResIII	PF04851.15	4e-08	1	1
MGP_DBA2J_P0051136	BRK	PF07533.16	3.7e-17	1	1
MGP_DBA2J_P0051137	BRK	PF07533.16	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0051148	-	835	-	MGP_DBA2J_P0051148	235 (aa)	-	-
MGP_DBA2J_T0051149	-	487	-	MGP_DBA2J_P0051149	83 (aa)	-	-
MGP_DBA2J_T0051152	-	736	-	MGP_DBA2J_P0051152	119 (aa)	-	-
MGP_DBA2J_T0051140	-	1584	-	-	- (aa)	-	-
MGP_DBA2J_T0051141	-	867	-	-	- (aa)	-	-
MGP_DBA2J_T0051142	-	426	-	-	- (aa)	-	-
MGP_DBA2J_T0051143	-	929	-	MGP_DBA2J_P0051143	254 (aa)	-	-
MGP_DBA2J_T0051144	-	942	-	MGP_DBA2J_P0051144	254 (aa)	-	-
MGP_DBA2J_T0051145	-	788	-	MGP_DBA2J_P0051145	224 (aa)	-	-
MGP_DBA2J_T0051146	-	879	-	MGP_DBA2J_P0051146	276 (aa)	-	-
MGP_DBA2J_T0051147	-	1858	-	MGP_DBA2J_P0051147	236 (aa)	-	-
MGP_DBA2J_T0051139	-	661	-	-	- (aa)	-	-
MGP_DBA2J_T0051138	-	863	-	MGP_DBA2J_P0051138	212 (aa)	-	-
MGP_DBA2J_T0051151	-	968	-	MGP_DBA2J_P0051151	119 (aa)	-	-
MGP_DBA2J_T0051150	-	1460	-	MGP_DBA2J_P0051150	113 (aa)	-	-
MGP_DBA2J_T0051137	-	5862	-	MGP_DBA2J_P0051137	1601 (aa)	-	-
MGP_DBA2J_T0051136	-	5858	XM_006527281	MGP_DBA2J_P0051136	1583 (aa)	XP_006527344	A0A140LHE2

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0024847	Smarca2	70	80.240	MGP_DBA2J_G0034272	Smarca4	92	79.726