EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0025176 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Minus strand
Length: 979093 bases
Position: chr2:3482093-4461185
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0052194	RRM_1	PF00076.22	2.5e-51	1	3
MGP_DBA2J_P0052194	RRM_1	PF00076.22	2.5e-51	2	3
MGP_DBA2J_P0052194	RRM_1	PF00076.22	2.5e-51	3	3
MGP_DBA2J_P0052197	RRM_1	PF00076.22	2.5e-51	1	3
MGP_DBA2J_P0052197	RRM_1	PF00076.22	2.5e-51	2	3
MGP_DBA2J_P0052197	RRM_1	PF00076.22	2.5e-51	3	3
MGP_DBA2J_P0052203	RRM_1	PF00076.22	2.6e-51	1	3
MGP_DBA2J_P0052203	RRM_1	PF00076.22	2.6e-51	2	3
MGP_DBA2J_P0052203	RRM_1	PF00076.22	2.6e-51	3	3
MGP_DBA2J_P0052204	RRM_1	PF00076.22	2.6e-51	1	3
MGP_DBA2J_P0052204	RRM_1	PF00076.22	2.6e-51	2	3
MGP_DBA2J_P0052204	RRM_1	PF00076.22	2.6e-51	3	3
MGP_DBA2J_P0052205	RRM_1	PF00076.22	2.7e-51	1	3
MGP_DBA2J_P0052205	RRM_1	PF00076.22	2.7e-51	2	3
MGP_DBA2J_P0052205	RRM_1	PF00076.22	2.7e-51	3	3
MGP_DBA2J_P0052200	RRM_1	PF00076.22	3.1e-51	1	3
MGP_DBA2J_P0052200	RRM_1	PF00076.22	3.1e-51	2	3
MGP_DBA2J_P0052200	RRM_1	PF00076.22	3.1e-51	3	3
MGP_DBA2J_P0052195	RRM_1	PF00076.22	3.2e-51	1	3
MGP_DBA2J_P0052195	RRM_1	PF00076.22	3.2e-51	2	3
MGP_DBA2J_P0052195	RRM_1	PF00076.22	3.2e-51	3	3
MGP_DBA2J_P0052198	RRM_1	PF00076.22	3.2e-51	1	3
MGP_DBA2J_P0052198	RRM_1	PF00076.22	3.2e-51	2	3
MGP_DBA2J_P0052198	RRM_1	PF00076.22	3.2e-51	3	3
MGP_DBA2J_P0052202	RRM_1	PF00076.22	3.4e-51	1	3
MGP_DBA2J_P0052202	RRM_1	PF00076.22	3.4e-51	2	3
MGP_DBA2J_P0052202	RRM_1	PF00076.22	3.4e-51	3	3
MGP_DBA2J_P0052201	RRM_1	PF00076.22	4.9e-39	1	3
MGP_DBA2J_P0052201	RRM_1	PF00076.22	4.9e-39	2	3
MGP_DBA2J_P0052201	RRM_1	PF00076.22	4.9e-39	3	3
MGP_DBA2J_P0052206	RRM_1	PF00076.22	5.8e-39	1	3
MGP_DBA2J_P0052206	RRM_1	PF00076.22	5.8e-39	2	3
MGP_DBA2J_P0052206	RRM_1	PF00076.22	5.8e-39	3	3
MGP_DBA2J_P0052196	RRM_1	PF00076.22	6.1e-39	1	3
MGP_DBA2J_P0052196	RRM_1	PF00076.22	6.1e-39	2	3
MGP_DBA2J_P0052196	RRM_1	PF00076.22	6.1e-39	3	3
MGP_DBA2J_P0052199	RRM_1	PF00076.22	6.5e-39	1	3
MGP_DBA2J_P0052199	RRM_1	PF00076.22	6.5e-39	2	3
MGP_DBA2J_P0052199	RRM_1	PF00076.22	6.5e-39	3	3
MGP_DBA2J_P0052213	RRM_1	PF00076.22	7.5e-19	1	1
MGP_DBA2J_P0052209	RRM_1	PF00076.22	2.4e-15	1	1
MGP_DBA2J_P0052216	RRM_1	PF00076.22	2.2e-14	1	1
MGP_DBA2J_P0052218	RRM_1	PF00076.22	1.1e-13	1	1
MGP_DBA2J_P0052219	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0052220	-	1972	-	-	- (aa)	-	-
MGP_DBA2J_T0052202	-	2525	-	MGP_DBA2J_P0052202	520 (aa)	-	-
MGP_DBA2J_T0052203	-	1721	-	MGP_DBA2J_P0052203	488 (aa)	-	-
MGP_DBA2J_T0052200	-	3271	-	MGP_DBA2J_P0052200	508 (aa)	-	-
MGP_DBA2J_T0052201	-	2223	-	MGP_DBA2J_P0052201	440 (aa)	-	-
MGP_DBA2J_T0052206	-	1906	-	MGP_DBA2J_P0052206	460 (aa)	-	-
MGP_DBA2J_T0052207	-	1996	-	MGP_DBA2J_P0052207	443 (aa)	-	-
MGP_DBA2J_T0052204	-	2016	-	MGP_DBA2J_P0052204	488 (aa)	-	-
MGP_DBA2J_T0052205	-	2022	-	MGP_DBA2J_P0052205	490 (aa)	-	-
MGP_DBA2J_T0052215	-	2075	-	-	- (aa)	-	-
MGP_DBA2J_T0052208	-	1240	-	-	- (aa)	-	-
MGP_DBA2J_T0052209	-	1024	-	MGP_DBA2J_P0052209	276 (aa)	-	-
MGP_DBA2J_T0052197	-	7489	-	MGP_DBA2J_P0052197	484 (aa)	-	-
MGP_DBA2J_T0052217	-	4143	-	-	- (aa)	-	-
MGP_DBA2J_T0052216	-	402	-	MGP_DBA2J_P0052216	92 (aa)	-	-
MGP_DBA2J_T0052221	-	769	-	-	- (aa)	-	-
MGP_DBA2J_T0052211	-	405	-	-	- (aa)	-	-
MGP_DBA2J_T0052210	-	4806	-	-	- (aa)	-	-
MGP_DBA2J_T0052213	-	630	-	MGP_DBA2J_P0052213	134 (aa)	-	-
MGP_DBA2J_T0052212	-	923	-	-	- (aa)	-	-
MGP_DBA2J_T0052196	-	8538	-	MGP_DBA2J_P0052196	478 (aa)	-	-
MGP_DBA2J_T0052214	-	4802	-	-	- (aa)	-	-
MGP_DBA2J_T0052194	-	7716	XM_006497333	MGP_DBA2J_P0052194	484 (aa)	XP_006497396	Q9Z0H4
MGP_DBA2J_T0052195	-	8420	-	MGP_DBA2J_P0052195	526 (aa)	-	-
MGP_DBA2J_T0052219	-	331	-	MGP_DBA2J_P0052219	46 (aa)	-	-
MGP_DBA2J_T0052218	-	529	-	MGP_DBA2J_P0052218	159 (aa)	-	-
MGP_DBA2J_T0052198	-	5460	-	MGP_DBA2J_P0052198	526 (aa)	-	-
MGP_DBA2J_T0052199	-	3853	-	MGP_DBA2J_P0052199	472 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0025176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0025176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0025176	Celf2	59	37.500	MGP_DBA2J_G0028550	Pabpc4	68	31.944
MGP_DBA2J_G0025176	Celf2	61	35.714	MGP_DBA2J_G0015878	Boll	57	32.000
MGP_DBA2J_G0025176	Celf2	87	33.333	MGP_DBA2J_G0028258	Elavl2	83	39.506
MGP_DBA2J_G0025176	Celf2	79	80.952	MGP_DBA2J_G0034715	Celf6	91	45.567
MGP_DBA2J_G0025176	Celf2	100	88.060	MGP_DBA2J_G0025972	Celf1	100	80.082
MGP_DBA2J_G0025176	Celf2	90	55.556	MGP_DBA2J_G0024042	Celf4	100	41.787
MGP_DBA2J_G0025176	Celf2	61	34.177	MGP_DBA2J_G0032905	Tial1	65	31.481
MGP_DBA2J_G0025176	Celf2	77	39.474	MGP_DBA2J_G0035211	Rbms3	75	37.079
MGP_DBA2J_G0025176	Celf2	51	35.443	MGP_DBA2J_G0030794	Tia1	83	35.443
MGP_DBA2J_G0025176	Celf2	64	43.210	MGP_DBA2J_G0033155	Elavl1	81	43.210
MGP_DBA2J_G0025176	Celf2	57	35.714	MGP_DBA2J_G0021631	Pabpc1	51	34.884
MGP_DBA2J_G0025176	Celf2	57	34.211	MGP_DBA2J_G0022975	Pabpc6	51	34.211
MGP_DBA2J_G0025176	Celf2	77	39.474	MGP_DBA2J_G0017687	Rbms2	51	39.474
MGP_DBA2J_G0025176	Celf2	61	38.272	MGP_DBA2J_G0028389	Elavl4	81	38.272
MGP_DBA2J_G0025176	Celf2	94	83.333	MGP_DBA2J_G0027374	Celf3	90	55.801
MGP_DBA2J_G0025176	Celf2	82	33.333	MGP_DBA2J_G0017327	Cirbp	80	32.558
MGP_DBA2J_G0025176	Celf2	57	34.884	MGP_DBA2J_G0026666	Pabpc1l	53	34.884
MGP_DBA2J_G0025176	Celf2	88	32.099	MGP_DBA2J_G0035549	Rbmx	78	30.000
MGP_DBA2J_G0025176	Celf2	82	34.667	MGP_DBA2J_G0034286	Elavl3	73	40.741
MGP_DBA2J_G0025176	Celf2	92	53.659	MGP_DBA2J_G0017401	Celf5	93	59.770