EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0025210 (Gene tree)
Gene ID: -
Gene Symbol: Arl5b
Alias: 4930587A11Rik|AW146430|Arl8
Full Name: ADP-ribosylation factor-like 5B
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 33631 bases
Position: chr2:12033651-12067281
Accession: 1923119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0052426	MMR_HSR1	PF01926.23	8.5e-07	1	1
MGP_DBA2J_P0052428	MMR_HSR1	PF01926.23	9.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0052431	-	778	-	MGP_DBA2J_P0052431	30 (aa)	-	-
MGP_DBA2J_T0052430	-	481	-	MGP_DBA2J_P0052430	35 (aa)	-	-
MGP_DBA2J_T0052433	-	706	-	MGP_DBA2J_P0052433	56 (aa)	-	-
MGP_DBA2J_T0052432	-	3210	-	-	- (aa)	-	-
MGP_DBA2J_T0052426	-	6931	XM_017319316	MGP_DBA2J_P0052426	171 (aa)	XP_017174805	A0A0A6YWH0
MGP_DBA2J_T0052428	-	6979	-	MGP_DBA2J_P0052428	180 (aa)	-	-
MGP_DBA2J_T0052429	-	1035	-	MGP_DBA2J_P0052429	40 (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0025210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0025210's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0025210	Arl5b	92	39.506	MGP_DBA2J_G0022767	Arl6	89	39.157
MGP_DBA2J_G0025210	Arl5b	84	33.562	MGP_DBA2J_G0016365	Arl8a	78	33.553
MGP_DBA2J_G0025210	Arl5b	90	42.593	MGP_DBA2J_G0016133	Arl4c	85	42.169
MGP_DBA2J_G0025210	Arl5b	83	30.667	MGP_DBA2J_G0030921	Arl8b	78	30.667
MGP_DBA2J_G0025210	Arl5b	96	37.500	MGP_DBA2J_G0027122	Arl14	90	37.500
MGP_DBA2J_G0025210	Arl5b	99	44.444	MGP_DBA2J_G0030326	Arf5	100	44.444
MGP_DBA2J_G0025210	Arl5b	98	81.437	MGP_DBA2J_G0025577	Arl5a	100	79.888
MGP_DBA2J_G0025210	Arl5b	94	43.373	MGP_DBA2J_G0019532	Arl4a	85	43.787
MGP_DBA2J_G0025210	Arl5b	99	43.094	MGP_DBA2J_G0025054	Arl3	99	43.094
MGP_DBA2J_G0025210	Arl5b	93	51.572	MGP_DBA2J_G0017471	Arl1	96	50.286
MGP_DBA2J_G0025210	Arl5b	98	49.718	MGP_DBA2J_G0022137	Arf3	98	49.718
MGP_DBA2J_G0025210	Arl5b	67	30.952	MGP_DBA2J_G0026792	Rab22a	61	30.952
MGP_DBA2J_G0025210	Arl5b	92	37.126	MGP_DBA2J_G0026851	Arfrp1	84	40.196
MGP_DBA2J_G0025210	Arl5b	93	40.000	MGP_DBA2J_G0021271	Arl11	91	40.000
MGP_DBA2J_G0025210	Arl5b	65	34.211	MGP_DBA2J_G0020403	Arl10	55	34.211
MGP_DBA2J_G0025210	Arl5b	97	74.286	MGP_DBA2J_G0018880	Arl5c	98	74.286
MGP_DBA2J_G0025210	Arl5b	94	39.759	MGP_DBA2J_G0019042	Arl4d	83	39.759
MGP_DBA2J_G0025210	Arl5b	96	44.512	MGP_DBA2J_G0024584	Arl2	90	44.242
MGP_DBA2J_G0025210	Arl5b	98	49.718	MGP_DBA2J_G0019103	Arf2	98	49.718