EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_DBA2J_G0025344 (Gene tree)
Gene ID: -
Gene Symbol: Rpl7a
Alias: Surf-3|Surf3|surfeit 3
Full Name: ribosomal protein L7A
Gene Type: protein_coding
Species: Mus_musculus_dba2j
Status: putative
Strand: Plus strand
Length: 5068 bases
Position: chr2:23752290-23757357
Accession: 1353472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_DBA2J_P0053168	Ribosomal_L7Ae	PF01248.26	2.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_DBA2J_T0053168	-	962	-	MGP_DBA2J_P0053168	282 (aa)	-	P12970
MGP_DBA2J_T0053169	-	835	-	-	- (aa)	-	-
MGP_DBA2J_T0053173	-	877	-	-	- (aa)	-	-
MGP_DBA2J_T0053172	-	525	-	MGP_DBA2J_P0053172	174 (aa)	-	-
MGP_DBA2J_T0053171	-	977	-	MGP_DBA2J_P0053171	307 (aa)	-	-
MGP_DBA2J_T0053170	-	1000	-	-	- (aa)	-	-
MGP_DBA2J_T0053176	-	356	-	-	- (aa)	-	-
MGP_DBA2J_T0053175	-	593	-	-	- (aa)	-	-
MGP_DBA2J_T0053174	-	834	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_DBA2J_G0025344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_DBA2J_G0025344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_DBA2J_G0025344	Rpl7a	87	84.553	MGP_DBA2J_G0026556	Gm14214	99	84.553
MGP_DBA2J_G0025344	Rpl7a	95	88.554	MGP_DBA2J_G0034805	Gm4978	85	100.000
MGP_DBA2J_G0025344	Rpl7a	100	90.071	MGP_DBA2J_G0031623	-	94	89.888